Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 AC110597.1-201ENST00000562669 3176 ntBASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 AC022034.1-201ENST00000512867 2156 ntBASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3CQ6NXT2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 ZNF969P-201ENST00000510345 2341 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 XKRY2-202ENST00000623874 1581 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 XKRY-202ENST00000624960 1581 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AL353743.3-201ENST00000442109 1468 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 MAPK10-261ENST00000641050 3109 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 SNORD35A-201ENST00000363389 86 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 RN7SKP237-201ENST00000364663 301 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 DHFRP2-201ENST00000414224 547 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC003989.1-201ENST00000434569 565 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 PCNPP2-201ENST00000441651 455 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 RARRES2P3-201ENST00000457739 473 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC021006.1-201ENST00000489849 553 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 GM2AP2-201ENST00000491764 562 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 HSD3BP3-201ENST00000514706 994 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 OR5D2P-201ENST00000524390 911 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 OR4A13P-201ENST00000529316 942 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC005632.2-201ENST00000564271 828 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 MIR5095-201ENST00000578844 88 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AL135999.3-201ENST00000610501 812 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC012653.2-201ENST00000621880 420 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC073862.4-201ENST00000622982 854 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 CLCA3P-203ENST00000490028 2781 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 AC062022.1-201ENST00000451026 1684 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 CASC19-228ENST00000641414 1684 ntBASIC5.98□□□□□ -1.45
H3F3CQ6NXT2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AL049634.1-201ENST00000453770 1720 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AC007159.1-201ENST00000566529 4706 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 RNU1-46P-201ENST00000384425 164 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 MIR188-201ENST00000385034 86 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 RAB5CP1-201ENST00000395972 580 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 YWHAZP6-201ENST00000399764 738 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 POU5F1P5-201ENST00000445059 658 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AL139156.3-201ENST00000454802 394 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AL352984.2-201ENST00000611153 546 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms