Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 ZSWIM5P3-201ENST00000511265 2743 ntBASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 AL645927.1-201ENST00000396783 406 ntBASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 AL713922.1-201ENST00000416477 747 ntBASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 IGLV3-6-201ENST00000523937 250 ntBASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 AC009120.3-201ENST00000563335 499 ntBASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC10.07□□□□□ -0.8
SNAPC4Q5SXM2 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 AC103591.2-201ENST00000265259 766 ntBASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 MTHFD2P5-201ENST00000320415 844 ntBASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 AC093166.4-201ENST00000457867 318 ntBASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 HMGN2P36-201ENST00000529541 409 ntBASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 AC138915.4-201ENST00000565549 4147 ntBASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 CLCA3P-203ENST00000490028 2781 ntBASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 MAPK10-287ENST00000641217 3037 ntBASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SNAPC4Q5SXM2 LINC02019-201ENST00000608605 2060 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AL445238.1-204ENST00000400311 463 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AK4P4-201ENST00000419465 646 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 RPA2P2-201ENST00000419698 796 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AL662874.1-201ENST00000426065 230 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC016027.4-201ENST00000450866 277 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC115223.1-201ENST00000466377 870 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 BX510359.5-201ENST00000515651 304 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 DPPA2P4-201ENST00000563717 878 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AL021918.2-201ENST00000613415 194 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC010624.4-201ENST00000597606 1351 ntBASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
SNAPC4Q5SXM2 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 RNA5SP234-201ENST00000363916 119 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AC012075.1-201ENST00000436549 580 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 CNOT7P2-201ENST00000441051 832 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms