Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 UG0898H09-202ENST00000623646 7040 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC074141.1-201ENST00000588129 2995 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AL133243.4-201ENST00000623116 3109 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 OR7E25P-201ENST00000344844 931 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AL023284.3-201ENST00000407767 334 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AL139415.1-201ENST00000424862 352 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC084754.1-201ENST00000463466 464 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC023194.2-201ENST00000465398 406 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 MTND6P8-201ENST00000503471 522 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC015818.6-201ENST00000584274 634 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AL096712.1-201ENST00000614561 159 ntBASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
SHROOM1Q2M3G4 AC008627.1-201ENST00000517511 1704 ntBASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHROOM1Q2M3G4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC125238.2-201ENST00000430003 1440 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 RNA5SP273-201ENST00000362484 113 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 RNA5SP477-201ENST00000362639 119 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AL096711.1-201ENST00000404780 554 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 U3.43-201ENST00000410734 213 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AL354890.1-201ENST00000413730 346 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 ATP5LP2-201ENST00000440646 311 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC092824.1-201ENST00000483524 576 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 LSM3P4-201ENST00000502948 309 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 KHDC1P1-201ENST00000511053 508 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AP002345.2-201ENST00000609961 904 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC026124.2-201ENST00000621847 656 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms