Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.97□□□□□ -1.29
UBE3AQ05086 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.97□□□□□ -1.29
UBE3AQ05086 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.97□□□□□ -1.29
UBE3AQ05086 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.97□□□□□ -1.29
UBE3AQ05086 OR7E25P-201ENST00000344844 931 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 RPL5P20-201ENST00000403848 896 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC244452.1-201ENST00000413798 141 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.97□□□□□ -1.29
UBE3AQ05086 BRD7P6-201ENST00000431406 1860 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC245452.2-201ENST00000435222 392 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC097463.1-201ENST00000447288 481 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.97□□□□□ -1.29
UBE3AQ05086 RBBP4P1-201ENST00000502424 1276 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.97□□□□□ -1.29
UBE3AQ05086 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.97□□□□□ -1.29
UBE3AQ05086 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC092821.2-201ENST00000545710 2042 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AC016144.1-201ENST00000548175 1087 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AL591767.3-201ENST00000554632 525 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.97□□□□□ -1.29
UBE3AQ05086 AC090826.1-203ENST00000569235 490 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AC009303.3-201ENST00000591103 736 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 MIR6729-201ENST00000618194 65 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AL391597.1-201ENST00000618707 694 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 AP000577.1-201ENST00000624366 878 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 HSPD1P9-201ENST00000420325 1636 ntBASIC6.97□□□□□ -1.29
UBE3AQ05086 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.97□□□□□ -1.29
UBE3AQ05086 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
UBE3AQ05086 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
UBE3AQ05086 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.96□□□□□ -1.29
UBE3AQ05086 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
UBE3AQ05086 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.96□□□□□ -1.29
UBE3AQ05086 AL049634.1-201ENST00000453770 1720 ntBASIC6.96□□□□□ -1.29
UBE3AQ05086 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
UBE3AQ05086 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.96□□□□□ -1.29
UBE3AQ05086 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
UBE3AQ05086 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.96□□□□□ -1.29
UBE3AQ05086 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.96□□□□□ -1.29
UBE3AQ05086 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.96□□□□□ -1.3
UBE3AQ05086 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.96□□□□□ -1.3
UBE3AQ05086 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 AC023490.2-201ENST00000359859 470 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 RN7SKP78-201ENST00000364711 318 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 DHFRP2-201ENST00000414224 547 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.96□□□□□ -1.3
UBE3AQ05086 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.96□□□□□ -1.3
UBE3AQ05086 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.96□□□□□ -1.3
UBE3AQ05086 AL645936.1-201ENST00000441979 518 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 RPL6P30-201ENST00000443382 862 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.96□□□□□ -1.3
UBE3AQ05086 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.96□□□□□ -1.3
UBE3AQ05086 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
UBE3AQ05086 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.96□□□□□ -1.3
UBE3AQ05086 AC011411.1-201ENST00000509592 876 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 AC130364.2-201ENST00000528639 604 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 NANOGNBP2-201ENST00000544753 553 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.96□□□□□ -1.3
UBE3AQ05086 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.96□□□□□ -1.3
UBE3AQ05086 AC012146.2-201ENST00000576545 416 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 SNORA70D-201ENST00000578836 135 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.96□□□□□ -1.3
UBE3AQ05086 RPSAP75-201ENST00000605848 301 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 AC100814.1-201ENST00000606963 623 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 AL157762.1-201ENST00000619612 415 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.96□□□□□ -1.3
UBE3AQ05086 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
UBE3AQ05086 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
UBE3AQ05086 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.96□□□□□ -1.3
UBE3AQ05086 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 AC022613.3-201ENST00000560740 1346 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms