Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC027281.1-201ENST00000574178 758 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 WBP1LP11-201ENST00000586141 328 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AC073111.2-201ENST00000605657 1075 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 WBP1LP8-201ENST00000617401 327 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AP000577.1-201ENST00000624366 878 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AP003400.6-201ENST00000624698 740 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AC011504.1-201ENST00000623331 4103 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AC090220.1-201ENST00000593078 1699 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 CR382285.2-201ENST00000624662 1495 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 AC009220.2-201ENST00000489759 1751 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CX3CL1P78423 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 AC007485.2-201ENST00000623493 1667 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CX3CL1P78423 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CX3CL1P78423 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 AL353625.1-202ENST00000366273 571 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 RNU6-883P-201ENST00000384597 107 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CX3CL1P78423 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 RAB5CP1-201ENST00000395972 580 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CL1P78423 RPL7P58-201ENST00000402913 758 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 RAB9AP4-201ENST00000415230 609 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CL1P78423 RPS7P12-201ENST00000422385 582 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AL445528.1-201ENST00000426330 420 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 BMP6P1-201ENST00000431230 679 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CL1P78423 SEPT14P12-201ENST00000442280 560 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AL451063.1-201ENST00000450164 1133 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 RPL37AP8-201ENST00000494116 276 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 SNORA81.2-201ENST00000516868 170 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AP002004.1-206ENST00000532441 876 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.32□□□□□ -1.56
CX3CL1P78423 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CL1P78423 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CX3CL1P78423 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CL1P78423 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AC093524.1-201ENST00000564266 1094 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 OOSP1P2-201ENST00000579644 351 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 MIR3159-201ENST00000584572 74 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.32□□□□□ -1.56
CX3CL1P78423 RPL21P136-201ENST00000605378 396 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 AL137000.1-201ENST00000610528 1244 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 AC127071.2-201ENST00000623293 527 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 SNX18P10-201ENST00000625014 519 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CX3CL1P78423 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CL1P78423 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CX3CL1P78423 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CX3CL1P78423 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 MTCO1P25-201ENST00000414449 1799 ntBASIC5.32□□□□□ -1.56
CX3CL1P78423 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CL1P78423 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.31□□□□□ -1.56
CX3CL1P78423 AC087565.3-202ENST00000642085 1603 ntBASIC5.31□□□□□ -1.56
CX3CL1P78423 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms