Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SNORA51.9-201ENST00000384295 124 ntBASIC5.24□□□□□ -1.57
LMO4P61968 RN7SKP121-201ENST00000410842 305 ntBASIC5.24□□□□□ -1.57
LMO4P61968 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO4P61968 RPS7P14-201ENST00000426405 583 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 AL389925.1-201ENST00000432257 728 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO4P61968 RPL6P30-201ENST00000443382 862 ntBASIC5.24□□□□□ -1.57
LMO4P61968 HIGD1AP16-201ENST00000450986 258 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO4P61968 AL049829.1-201ENST00000465411 156 ntBASIC5.24□□□□□ -1.57
LMO4P61968 RPL34P33-201ENST00000486062 334 ntBASIC5.24□□□□□ -1.57
LMO4P61968 MTND6P8-201ENST00000503471 522 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC090568.1-201ENST00000509499 856 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 IGKV3D-25-201ENST00000519599 235 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO4P61968 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO4P61968 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 AC092332.1-201ENST00000563684 829 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 AC139493.1-201ENST00000604368 397 ntBASIC5.24□□□□□ -1.57
LMO4P61968 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO4P61968 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 AC092266.1-201ENST00000610958 165 ntBASIC5.24□□□□□ -1.57
LMO4P61968 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.24□□□□□ -1.57
LMO4P61968 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.24□□□□□ -1.57
LMO4P61968 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LMO4P61968 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.24□□□□□ -1.57
LMO4P61968 AC005332.9-201ENST00000620266 2921 ntBASIC5.24□□□□□ -1.57
LMO4P61968 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 SPATA31C1-201ENST00000420021 3895 ntBASIC5.24□□□□□ -1.57
LMO4P61968 CDY10P-201ENST00000452415 1567 ntBASIC5.24□□□□□ -1.57
LMO4P61968 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMO4P61968 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.24□□□□□ -1.57
LMO4P61968 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 LPAL2-203ENST00000454031 2498 ntBASIC5.23□□□□□ -1.57
LMO4P61968 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
LMO4P61968 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 RNA5SP188-201ENST00000362916 129 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AL050335.1-201ENST00000396909 869 ntBASIC5.23□□□□□ -1.57
LMO4P61968 RN7SKP144-201ENST00000411108 279 ntBASIC5.23□□□□□ -1.57
LMO4P61968 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 PPIAP7-201ENST00000454070 489 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AC094085.1-201ENST00000468914 584 ntBASIC5.23□□□□□ -1.57
LMO4P61968 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 AC092824.1-201ENST00000483524 576 ntBASIC5.23□□□□□ -1.57
LMO4P61968 LSM3P4-201ENST00000502948 309 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.23□□□□□ -1.57
LMO4P61968 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.23□□□□□ -1.57
LMO4P61968 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 AC084337.1-201ENST00000524809 686 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AP000620.1-201ENST00000527147 504 ntBASIC5.23□□□□□ -1.57
LMO4P61968 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 TRIM51DP-201ENST00000529746 596 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AP000662.1-201ENST00000530952 487 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 CYCSP38-201ENST00000559840 322 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.23□□□□□ -1.57
LMO4P61968 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.23□□□□□ -1.57
LMO4P61968 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.23□□□□□ -1.57
LMO4P61968 AC008507.3-201ENST00000585753 472 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 AC108865.2-201ENST00000606881 432 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AL008723.3-201ENST00000608926 449 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms