Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
VCPP55072 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
VCPP55072 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.01□□□□□ -1.29
VCPP55072 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VCPP55072 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7□□□□□ -1.29
VCPP55072 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
VCPP55072 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 AP001157.1-201ENST00000550837 2339 ntBASIC7□□□□□ -1.29
VCPP55072 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
VCPP55072 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7□□□□□ -1.29
VCPP55072 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 AL591848.4-201ENST00000567832 3472 ntBASIC7□□□□□ -1.29
VCPP55072 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7□□□□□ -1.29
VCPP55072 SNORA70.3-201ENST00000365075 132 ntBASIC7□□□□□ -1.29
VCPP55072 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7□□□□□ -1.29
VCPP55072 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7□□□□□ -1.29
VCPP55072 RPS3P2-201ENST00000421346 701 ntBASIC7□□□□□ -1.29
VCPP55072 GAPDHP57-201ENST00000424400 585 ntBASIC7□□□□□ -1.29
VCPP55072 PAICSP2-201ENST00000429118 1150 ntBASIC7□□□□□ -1.29
VCPP55072 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 GAPDHP20-201ENST00000444107 1007 ntBASIC7□□□□□ -1.29
VCPP55072 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7□□□□□ -1.29
VCPP55072 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7□□□□□ -1.29
VCPP55072 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7□□□□□ -1.29
VCPP55072 AC006539.1-201ENST00000481419 501 ntBASIC7□□□□□ -1.29
VCPP55072 RNA5SP318-201ENST00000516352 92 ntBASIC7□□□□□ -1.29
VCPP55072 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7□□□□□ -1.29
VCPP55072 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7□□□□□ -1.29
VCPP55072 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7□□□□□ -1.29
VCPP55072 AC135983.3-201ENST00000528049 1226 ntBASIC7□□□□□ -1.29
VCPP55072 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7□□□□□ -1.29
VCPP55072 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7□□□□□ -1.29
VCPP55072 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7□□□□□ -1.29
VCPP55072 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7□□□□□ -1.29
VCPP55072 OR7A11P-201ENST00000597719 953 ntBASIC7□□□□□ -1.29
VCPP55072 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7□□□□□ -1.29
VCPP55072 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7□□□□□ -1.29
VCPP55072 AP000577.1-201ENST00000624366 878 ntBASIC7□□□□□ -1.29
VCPP55072 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7□□□□□ -1.29
VCPP55072 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7□□□□□ -1.29
VCPP55072 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
VCPP55072 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7□□□□□ -1.29
VCPP55072 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
VCPP55072 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7□□□□□ -1.29
VCPP55072 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 AL391261.1-201ENST00000555712 1479 ntBASIC6.99□□□□□ -1.29
VCPP55072 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
VCPP55072 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.99□□□□□ -1.29
VCPP55072 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
VCPP55072 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VCPP55072 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 RNA5SP333-201ENST00000363466 118 ntBASIC6.99□□□□□ -1.29
VCPP55072 RNA5SP334-201ENST00000364825 118 ntBASIC6.99□□□□□ -1.29
VCPP55072 AL031985.1-201ENST00000392713 418 ntBASIC6.99□□□□□ -1.29
VCPP55072 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 LYPLA1P3-201ENST00000402650 695 ntBASIC6.99□□□□□ -1.29
VCPP55072 AL359694.1-201ENST00000403247 604 ntBASIC6.99□□□□□ -1.29
VCPP55072 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.99□□□□□ -1.29
VCPP55072 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 AC073109.1-201ENST00000445066 978 ntBASIC6.99□□□□□ -1.29
VCPP55072 AC133965.1-201ENST00000452984 354 ntBASIC6.99□□□□□ -1.29
VCPP55072 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
VCPP55072 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VCPP55072 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.99□□□□□ -1.29
VCPP55072 HMGN1P17-201ENST00000513734 295 ntBASIC6.99□□□□□ -1.29
VCPP55072 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.99□□□□□ -1.29
VCPP55072 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.99□□□□□ -1.29
VCPP55072 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.99□□□□□ -1.29
VCPP55072 AL953862.2-201ENST00000603089 820 ntBASIC6.99□□□□□ -1.29
VCPP55072 MIR6768-201ENST00000610734 72 ntBASIC6.99□□□□□ -1.29
VCPP55072 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.99□□□□□ -1.29
VCPP55072 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VCPP55072 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 CUBNP3-201ENST00000457461 1784 ntBASIC6.99□□□□□ -1.29
VCPP55072 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
VCPP55072 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
VCPP55072 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.99□□□□□ -1.29
VCPP55072 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
VCPP55072 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.99□□□□□ -1.29
VCPP55072 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VCPP55072 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms