Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
RNF144AP50876 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
RNF144AP50876 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
RNF144AP50876 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 AC073621.2-201ENST00000381380 1024 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 TRBV7-5-201ENST00000390382 345 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 RPL26P37-201ENST00000411983 438 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF144AP50876 HMGB3P31-201ENST00000413333 595 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AL354751.2-201ENST00000415471 210 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF144AP50876 AC066692.1-201ENST00000421721 457 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 OR4F13P-201ENST00000428478 931 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF144AP50876 AL441963.1-201ENST00000435137 792 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.68□□□□□ -1.18
RNF144AP50876 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF144AP50876 RPL7P31-201ENST00000450192 724 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC7.68□□□□□ -1.18
RNF144AP50876 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 EIF3LP2-201ENST00000457262 807 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 RPS20P4-201ENST00000461659 355 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF144AP50876 RN7SL472P-201ENST00000492799 293 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 RNU6-327P-201ENST00000516270 127 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF144AP50876 AC013701.1-201ENST00000522657 465 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 AC034102.1-201ENST00000552016 604 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC087477.6-201ENST00000559595 843 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF144AP50876 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF144AP50876 MIR4795-201ENST00000584182 89 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 OR1X1P-201ENST00000606159 931 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC010542.5-201ENST00000612427 382 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 AC027139.2-201ENST00000615639 448 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AL445264.1-201ENST00000621719 171 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF144AP50876 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.68□□□□□ -1.18
RNF144AP50876 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 EIF4BP2-201ENST00000416702 1794 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
RNF144AP50876 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF144AP50876 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RNF144AP50876 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 AL359694.2-201ENST00000567753 1615 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 MAPK10-285ENST00000641207 2746 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
RNF144AP50876 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 TRIM53BP-201ENST00000532912 1720 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
RNF144AP50876 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
RNF144AP50876 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 AF228730.7-203ENST00000641436 1804 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF144AP50876 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RNF144AP50876 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF144AP50876 AC007066.1-201ENST00000392902 381 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RNF144AP50876 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF144AP50876 RN7SKP85-201ENST00000411349 318 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF144AP50876 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF144AP50876 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.67□□□□□ -1.18
RNF144AP50876 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF144AP50876 VN1R36P-201ENST00000414936 291 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF144AP50876 AC004129.1-201ENST00000417617 796 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 AC019050.1-201ENST00000418508 492 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 AL121878.1-201ENST00000418638 859 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF144AP50876 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF144AP50876 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF144AP50876 AC244505.5-201ENST00000443639 207 ntBASIC7.67□□□□□ -1.18
RNF144AP50876 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF144AP50876 VDAC2P4-201ENST00000452925 711 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms