Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 OR3D1P-201ENST00000438288 955 ntBASIC8.03□□□□□ -1.12
COL15A1P39059 RPL31P15-201ENST00000449770 338 ntBASIC8.03□□□□□ -1.12
COL15A1P39059 CR383658.1-201ENST00000514609 734 ntBASIC8.03□□□□□ -1.12
COL15A1P39059 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.03□□□□□ -1.12
COL15A1P39059 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.03□□□□□ -1.12
COL15A1P39059 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.03□□□□□ -1.12
COL15A1P39059 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.03□□□□□ -1.12
COL15A1P39059 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
COL15A1P39059 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
COL15A1P39059 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
COL15A1P39059 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.03□□□□□ -1.12
COL15A1P39059 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.03□□□□□ -1.12
COL15A1P39059 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.03□□□□□ -1.12
COL15A1P39059 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
COL15A1P39059 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
COL15A1P39059 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
COL15A1P39059 UGT2B27P-201ENST00000505092 1620 ntBASIC8.02□□□□□ -1.12
COL15A1P39059 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
COL15A1P39059 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
COL15A1P39059 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
COL15A1P39059 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.02□□□□□ -1.12
COL15A1P39059 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.02□□□□□ -1.13
COL15A1P39059 SNORA21-201ENST00000362423 132 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC8.02□□□□□ -1.13
COL15A1P39059 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC8.02□□□□□ -1.13
COL15A1P39059 SEPT14P1-201ENST00000458703 648 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC8.02□□□□□ -1.13
COL15A1P39059 AC114781.3-201ENST00000512083 142 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC8.02□□□□□ -1.13
COL15A1P39059 RNA5SP434-201ENST00000516647 121 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.02□□□□□ -1.13
COL15A1P39059 CETN3-206ENST00000522864 738 ntTSL 3 BASIC8.02□□□□□ -1.13
COL15A1P39059 AP003396.4-201ENST00000527574 265 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC8.02□□□□□ -1.13
COL15A1P39059 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 AC020978.7-201ENST00000575953 1187 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.02□□□□□ -1.13
COL15A1P39059 FAM72A-208ENST00000607379 1139 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 AC010998.3-201ENST00000613871 631 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 AC013488.1-201ENST00000526618 1838 ntBASIC8.02□□□□□ -1.13
COL15A1P39059 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.02□□□□□ -1.13
COL15A1P39059 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.02□□□□□ -1.13
COL15A1P39059 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL15A1P39059 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.02□□□□□ -1.13
COL15A1P39059 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL15A1P39059 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL15A1P39059 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 CUBNP3-201ENST00000457461 1784 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL15A1P39059 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL15A1P39059 AC112243.1-201ENST00000623949 3851 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 TMSB4XP4-201ENST00000323496 618 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 RN7SKP292-201ENST00000365522 317 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
COL15A1P39059 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.01□□□□□ -1.13
COL15A1P39059 CFL1P4-201ENST00000451536 498 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 RN7SL273P-201ENST00000481561 299 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.01□□□□□ -1.13
COL15A1P39059 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.01□□□□□ -1.13
COL15A1P39059 IGKV1D-22-201ENST00000518953 324 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 MTND2P7-201ENST00000521337 640 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 AC027544.3-201ENST00000535082 757 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC8.01□□□□□ -1.13
COL15A1P39059 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.01□□□□□ -1.13
COL15A1P39059 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.01□□□□□ -1.13
COL15A1P39059 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
COL15A1P39059 AC012254.5-201ENST00000623573 478 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
COL15A1P39059 AL731556.1-201ENST00000394628 3711 ntBASIC8.01□□□□□ -1.13
COL15A1P39059 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
COL15A1P39059 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
COL15A1P39059 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.01□□□□□ -1.13
COL15A1P39059 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms