Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.11□□□□□ -1.27
LTBRP36941 OSBPL9P5-201ENST00000542581 171 ntBASIC7.11□□□□□ -1.27
LTBRP36941 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.11□□□□□ -1.27
LTBRP36941 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LTBRP36941 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC7.11□□□□□ -1.27
LTBRP36941 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.11□□□□□ -1.27
LTBRP36941 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.11□□□□□ -1.27
LTBRP36941 AC073333.2-201ENST00000603589 769 ntBASIC7.11□□□□□ -1.27
LTBRP36941 AC005034.4-201ENST00000603612 899 ntBASIC7.11□□□□□ -1.27
LTBRP36941 AC069304.3-201ENST00000603938 1084 ntBASIC7.11□□□□□ -1.27
LTBRP36941 SNORD96A-201ENST00000606577 79 ntBASIC7.11□□□□□ -1.27
LTBRP36941 AC093673.2-201ENST00000609674 331 ntBASIC7.11□□□□□ -1.27
LTBRP36941 AC091304.6-201ENST00000619761 202 ntBASIC7.11□□□□□ -1.27
LTBRP36941 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LTBRP36941 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LTBRP36941 AC079416.3-201ENST00000624479 549 ntBASIC7.11□□□□□ -1.27
LTBRP36941 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.11□□□□□ -1.27
LTBRP36941 OR10AB1P-202ENST00000641219 1686 ntBASIC7.11□□□□□ -1.27
LTBRP36941 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LTBRP36941 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LTBRP36941 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LTBRP36941 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LTBRP36941 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.11□□□□□ -1.27
LTBRP36941 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.11□□□□□ -1.27
LTBRP36941 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
LTBRP36941 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LTBRP36941 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LTBRP36941 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
LTBRP36941 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 AL355578.1-201ENST00000607405 1328 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.1□□□□□ -1.27
LTBRP36941 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 AC004386.1-201ENST00000393214 761 ntBASIC7.1□□□□□ -1.27
LTBRP36941 ATP5F1P2-201ENST00000398143 760 ntBASIC7.1□□□□□ -1.27
LTBRP36941 LUZP4P1-201ENST00000415420 344 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 MTCO3P4-201ENST00000419236 787 ntBASIC7.1□□□□□ -1.27
LTBRP36941 GAPDHP57-201ENST00000424400 585 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 MTCYBP21-201ENST00000443300 1113 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 COX4I1P2-201ENST00000447446 547 ntBASIC7.1□□□□□ -1.27
LTBRP36941 HMGB1P7-201ENST00000450921 612 ntBASIC7.1□□□□□ -1.27
LTBRP36941 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC7.1□□□□□ -1.27
LTBRP36941 CBX1P5-201ENST00000475330 559 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC010374.1-201ENST00000503762 1237 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 AC027801.3-201ENST00000515049 698 ntBASIC7.1□□□□□ -1.27
LTBRP36941 BUD31P1-201ENST00000521828 359 ntBASIC7.1□□□□□ -1.27
LTBRP36941 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 OR10V3P-201ENST00000525712 725 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC007834.2-201ENST00000536310 343 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.1□□□□□ -1.27
LTBRP36941 AC009097.3-201ENST00000563557 1018 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC010735.1-201ENST00000567305 1026 ntBASIC7.1□□□□□ -1.27
LTBRP36941 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 MRPS5P4-201ENST00000592830 325 ntBASIC7.1□□□□□ -1.27
LTBRP36941 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 MTCO3P22-201ENST00000603219 784 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 AP003789.1-201ENST00000617737 605 ntBASIC7.1□□□□□ -1.27
LTBRP36941 AC025162.2-201ENST00000619602 560 ntBASIC7.1□□□□□ -1.27
LTBRP36941 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.1□□□□□ -1.27
LTBRP36941 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 AC027279.1-201ENST00000568885 4284 ntBASIC7.1□□□□□ -1.27
LTBRP36941 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 AC018717.1-201ENST00000457712 1505 ntBASIC7.1□□□□□ -1.27
LTBRP36941 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.1□□□□□ -1.27
LTBRP36941 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.1□□□□□ -1.27
LTBRP36941 KARSP1-201ENST00000451871 1752 ntBASIC7.1□□□□□ -1.27
LTBRP36941 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LTBRP36941 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms