Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC007159.1-201ENST00000566529 4706 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM23P36406 BRD7P1-201ENST00000557705 1915 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM23P36406 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM23P36406 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM23P36406 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM23P36406 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM23P36406 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM23P36406 AL139158.1-201ENST00000424719 340 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 AL139415.1-201ENST00000424862 352 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 AC068491.1-201ENST00000449539 1241 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 AC118758.1-202ENST00000454719 225 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 RARRES2P3-201ENST00000457739 473 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM23P36406 GM2AP2-201ENST00000491764 562 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM23P36406 AC091874.2-201ENST00000505889 720 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM23P36406 NATP-201ENST00000523491 878 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM23P36406 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM23P36406 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 TPRX1P1-201ENST00000557620 319 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 AC125494.2-201ENST00000602431 657 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 AC073046.2-201ENST00000604756 527 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 CASC19-274ENST00000642018 970 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 NEK2P2-201ENST00000438441 1338 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 AC010624.4-201ENST00000597606 1351 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM23P36406 CYP2G2P-201ENST00000594920 1485 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 AL359694.2-201ENST00000567753 1615 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 SAGE3P-201ENST00000619800 1635 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TRIM23P36406 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM23P36406 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM23P36406 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM23P36406 AC005261.2-201ENST00000593427 4258 ntBASIC6.39□□□□□ -1.39
TRIM23P36406 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM23P36406 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM23P36406 RN7SKP281-201ENST00000410472 352 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 DHFRP2-201ENST00000414224 547 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 OR5W1P-201ENST00000423705 938 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AKR1B10P1-201ENST00000425765 942 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM23P36406 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRIM23P36406 AC011742.2-201ENST00000443818 352 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM23P36406 AC093166.3-201ENST00000448785 303 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 OR7E22P-201ENST00000478335 1035 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AC005017.1-201ENST00000482002 490 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AC022415.1-202ENST00000486612 523 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AC122718.2-201ENST00000505325 591 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM23P36406 AC018797.1-201ENST00000510791 255 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM23P36406 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM23P36406 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM23P36406 AC005632.2-201ENST00000564271 828 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM23P36406 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 AL953862.2-201ENST00000603089 820 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 SNORA74.4-201ENST00000607595 199 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 uc_338.31-201ENST00000615595 186 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 MIR6811-201ENST00000620409 58 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AL683826.1-201ENST00000624104 627 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM23P36406 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM23P36406 AL117378.2-201ENST00000622916 1337 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms