Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 RN7SKP59-201ENST00000410520 314 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.41□□□□□ -1.22
SCN4AP35499 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.41□□□□□ -1.22
SCN4AP35499 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.41□□□□□ -1.22
SCN4AP35499 FTLP8-201ENST00000446770 267 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.41□□□□□ -1.22
SCN4AP35499 AC026254.2-201ENST00000475295 371 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 RN7SL466P-201ENST00000497546 295 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 OR5M14P-201ENST00000506803 618 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.41□□□□□ -1.22
SCN4AP35499 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SCN4AP35499 MFSD8-217ENST00000641178 4374 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SCN4AP35499 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.41□□□□□ -1.22
SCN4AP35499 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.41□□□□□ -1.22
SCN4AP35499 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SCN4AP35499 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SCN4AP35499 AC127526.2-201ENST00000426436 775 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.41□□□□□ -1.22
SCN4AP35499 EEF1B2P6-201ENST00000445713 673 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.41□□□□□ -1.22
SCN4AP35499 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.41□□□□□ -1.22
SCN4AP35499 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.41□□□□□ -1.22
SCN4AP35499 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.41□□□□□ -1.22
SCN4AP35499 AC005244.1-201ENST00000582566 339 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 AC015802.2-201ENST00000589690 189 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 AL137246.2-201ENST00000613439 662 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 AC021766.1-201ENST00000624404 741 ntBASIC7.41□□□□□ -1.22
SCN4AP35499 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
SCN4AP35499 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCN4AP35499 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCN4AP35499 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.4□□□□□ -1.22
SCN4AP35499 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCN4AP35499 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCN4AP35499 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SCN4AP35499 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.4□□□□□ -1.22
SCN4AP35499 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
SCN4AP35499 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SCN4AP35499 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.4□□□□□ -1.22
SCN4AP35499 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.4□□□□□ -1.22
SCN4AP35499 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.4□□□□□ -1.22
SCN4AP35499 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.4□□□□□ -1.22
SCN4AP35499 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.4□□□□□ -1.22
SCN4AP35499 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.4□□□□□ -1.22
SCN4AP35499 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
SCN4AP35499 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.4□□□□□ -1.23
SCN4AP35499 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.4□□□□□ -1.23
SCN4AP35499 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SCN4AP35499 OTX2P1-201ENST00000450956 354 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 AC138866.2-201ENST00000508650 584 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.4□□□□□ -1.23
SCN4AP35499 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.4□□□□□ -1.23
SCN4AP35499 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.4□□□□□ -1.23
SCN4AP35499 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.4□□□□□ -1.23
SCN4AP35499 AL645933.2-201ENST00000606743 1207 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 RN7SL544P-201ENST00000617232 284 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.4□□□□□ -1.23
SCN4AP35499 RN7SL763P-201ENST00000620922 284 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SCN4AP35499 Z93929.1-201ENST00000418200 1475 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SCN4AP35499 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SCN4AP35499 C4BPAP1-201ENST00000415474 1893 ntBASIC7.4□□□□□ -1.23
SCN4AP35499 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.4□□□□□ -1.23
SCN4AP35499 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.4□□□□□ -1.23
SCN4AP35499 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SCN4AP35499 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SCN4AP35499 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.39□□□□□ -1.23
SCN4AP35499 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
SCN4AP35499 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 AC092725.2-201ENST00000567658 1389 ntBASIC7.39□□□□□ -1.23
SCN4AP35499 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.39□□□□□ -1.23
SCN4AP35499 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
SCN4AP35499 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.39□□□□□ -1.23
SCN4AP35499 AK4P4-201ENST00000419465 646 ntBASIC7.39□□□□□ -1.23
SCN4AP35499 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.39□□□□□ -1.23
SCN4AP35499 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.39□□□□□ -1.23
SCN4AP35499 OR4A46P-201ENST00000527255 933 ntBASIC7.39□□□□□ -1.23
SCN4AP35499 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.39□□□□□ -1.23
SCN4AP35499 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.39□□□□□ -1.23
SCN4AP35499 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.39□□□□□ -1.23
SCN4AP35499 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SCN4AP35499 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN4AP35499 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SCN4AP35499 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms