Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.78□□□□□ -1.16
TM4SF1P30408 AL589674.2-201ENST00000604304 337 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 RPL12P48-201ENST00000605620 304 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 AP000864.1-201ENST00000609424 650 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 AC016252.1-201ENST00000609721 474 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 SDR42E1P1-201ENST00000611327 477 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TM4SF1P30408 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TM4SF1P30408 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.78□□□□□ -1.16
TM4SF1P30408 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
TM4SF1P30408 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
TM4SF1P30408 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
TM4SF1P30408 AC131649.2-201ENST00000624925 4439 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TM4SF1P30408 AC009120.2-204ENST00000621548 2032 ntBASIC7.78□□□□□ -1.16
TM4SF1P30408 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.77□□□□□ -1.16
TM4SF1P30408 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.77□□□□□ -1.17
TM4SF1P30408 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 AL023806.3-201ENST00000638502 2704 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TM4SF1P30408 RN7SKP160-201ENST00000363804 340 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 AL139415.1-201ENST00000424862 352 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 AC245884.2-201ENST00000426257 404 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.77□□□□□ -1.17
TM4SF1P30408 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.77□□□□□ -1.17
TM4SF1P30408 OR13C1P-201ENST00000457612 963 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 RN7SL515P-201ENST00000463999 297 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.77□□□□□ -1.17
TM4SF1P30408 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.77□□□□□ -1.17
TM4SF1P30408 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.77□□□□□ -1.17
TM4SF1P30408 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.77□□□□□ -1.17
TM4SF1P30408 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.77□□□□□ -1.17
TM4SF1P30408 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.77□□□□□ -1.17
TM4SF1P30408 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
TM4SF1P30408 OR8G3P-202ENST00000641572 1255 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.77□□□□□ -1.17
TM4SF1P30408 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TM4SF1P30408 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.77□□□□□ -1.17
TM4SF1P30408 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 AC024651.2-201ENST00000562480 2098 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TM4SF1P30408 AC105114.1-201ENST00000624795 1862 ntBASIC7.77□□□□□ -1.17
TM4SF1P30408 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
TM4SF1P30408 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.76□□□□□ -1.17
TM4SF1P30408 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.76□□□□□ -1.17
TM4SF1P30408 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.76□□□□□ -1.17
TM4SF1P30408 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
TM4SF1P30408 OR2M1P-201ENST00000318104 951 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 OR7E101P-201ENST00000400428 513 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 OR3A2-201ENST00000408891 1076 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.76□□□□□ -1.17
TM4SF1P30408 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.76□□□□□ -1.17
TM4SF1P30408 AL163193.1-201ENST00000444895 788 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.76□□□□□ -1.17
TM4SF1P30408 GEMIN2P1-201ENST00000454246 752 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 AL122020.1-201ENST00000472287 459 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 AC092824.1-201ENST00000483524 576 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 SETP21-201ENST00000514799 892 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.76□□□□□ -1.17
TM4SF1P30408 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.76□□□□□ -1.17
TM4SF1P30408 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 ADAM3B-201ENST00000569937 840 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 AC010547.6-201ENST00000571789 193 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.76□□□□□ -1.17
TM4SF1P30408 AL136131.3-201ENST00000607600 188 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 AL357562.1-201ENST00000624911 609 ntBASIC7.76□□□□□ -1.17
TM4SF1P30408 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.76□□□□□ -1.17
TM4SF1P30408 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.76□□□□□ -1.17
TM4SF1P30408 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TM4SF1P30408 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.76□□□□□ -1.17
TM4SF1P30408 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TM4SF1P30408 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.75□□□□□ -1.17
TM4SF1P30408 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.75□□□□□ -1.17
TM4SF1P30408 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.75□□□□□ -1.17
TM4SF1P30408 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TM4SF1P30408 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.75□□□□□ -1.17
TM4SF1P30408 AC110597.1-201ENST00000562669 3176 ntBASIC7.75□□□□□ -1.17
TM4SF1P30408 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TM4SF1P30408 RNA5SP132-201ENST00000364725 118 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms