Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC012254.3-201ENST00000591183 2117 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 HCFC2P1-201ENST00000392864 1592 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 AC110597.1-201ENST00000562669 3176 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.33□□□□□ -1.24
POLR2AP24928 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 RN7SKP59-201ENST00000410520 314 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 UBE2V2P3-201ENST00000433562 437 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC011225.1-201ENST00000457751 369 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 RN7SL561P-201ENST00000488553 281 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC012467.1-201ENST00000607740 256 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 AC005393.1-201ENST00000617916 584 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 CASC19-222ENST00000641321 1173 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 AL035555.1-201ENST00000404462 1790 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
POLR2AP24928 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 AL590004.4-201ENST00000566733 7060 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
POLR2AP24928 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
POLR2AP24928 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.32□□□□□ -1.24
POLR2AP24928 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 RNA5SP234-201ENST00000363916 119 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 SNORA43.1-201ENST00000364863 140 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.32□□□□□ -1.24
POLR2AP24928 AL391422.1-201ENST00000402155 436 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.32□□□□□ -1.24
POLR2AP24928 TRIM60P16-201ENST00000444048 694 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 COPS8P2-201ENST00000473228 627 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 ATP5LP3-201ENST00000514223 304 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 AC027026.1-201ENST00000532323 742 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 AC022404.1-201ENST00000555320 273 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.32□□□□□ -1.24
POLR2AP24928 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.32□□□□□ -1.24
POLR2AP24928 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.32□□□□□ -1.24
POLR2AP24928 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
POLR2AP24928 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.32□□□□□ -1.24
POLR2AP24928 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.32□□□□□ -1.24
POLR2AP24928 AC009950.2-201ENST00000636548 183 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
POLR2AP24928 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
POLR2AP24928 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
POLR2AP24928 PDZK1P1-202ENST00000425209 1350 ntBASIC7.32□□□□□ -1.24
POLR2AP24928 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
POLR2AP24928 OR7E101P-201ENST00000400428 513 ntBASIC7.31□□□□□ -1.24
POLR2AP24928 FABP7P2-201ENST00000429946 379 ntBASIC7.31□□□□□ -1.24
POLR2AP24928 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.31□□□□□ -1.24
POLR2AP24928 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.31□□□□□ -1.24
POLR2AP24928 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.31□□□□□ -1.24
POLR2AP24928 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.31□□□□□ -1.24
POLR2AP24928 CYCSP22-201ENST00000517555 339 ntBASIC7.31□□□□□ -1.24
POLR2AP24928 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.31□□□□□ -1.24
POLR2AP24928 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.31□□□□□ -1.24
POLR2AP24928 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.31□□□□□ -1.24
POLR2AP24928 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.31□□□□□ -1.24
POLR2AP24928 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
POLR2AP24928 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.31□□□□□ -1.24
POLR2AP24928 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.31□□□□□ -1.24
POLR2AP24928 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
POLR2AP24928 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
POLR2AP24928 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
POLR2AP24928 AC009948.5-201ENST00000624360 4406 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms