Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC245884.2-201ENST00000426257 404 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL5A1P20908 PCBP2P1-201ENST00000437262 977 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 AL353662.1-201ENST00000439099 327 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 RPSAP39-201ENST00000467439 883 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A1P20908 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.04□□□□□ -1.44
COL5A1P20908 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
COL5A1P20908 SETP21-201ENST00000514799 892 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 IGKV1D-22-201ENST00000518953 324 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.04□□□□□ -1.44
COL5A1P20908 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.04□□□□□ -1.44
COL5A1P20908 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A1P20908 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.04□□□□□ -1.44
COL5A1P20908 AC009120.3-201ENST00000563335 499 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.04□□□□□ -1.44
COL5A1P20908 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.04□□□□□ -1.44
COL5A1P20908 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.04□□□□□ -1.44
COL5A1P20908 MIR6793-201ENST00000612376 63 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 AL136228.1-201ENST00000622221 319 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 AC062022.1-201ENST00000451026 1684 ntBASIC6.04□□□□□ -1.44
COL5A1P20908 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL5A1P20908 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A1P20908 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A1P20908 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A1P20908 MITF-203ENST00000328528 4680 ntTSL 5 BASIC6.03□□□□□ -1.44
COL5A1P20908 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.03□□□□□ -1.44
COL5A1P20908 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL5A1P20908 TATDN2P3-201ENST00000452855 3665 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.03□□□□□ -1.44
COL5A1P20908 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.03□□□□□ -1.44
COL5A1P20908 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 OR2M1P-201ENST00000318104 951 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 MIR105-2-201ENST00000385083 81 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL5A1P20908 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL5A1P20908 RN7SKP293-201ENST00000411389 296 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.03□□□□□ -1.44
COL5A1P20908 NPM1P22-201ENST00000427761 952 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 DEFA9P-201ENST00000433042 285 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.03□□□□□ -1.44
COL5A1P20908 TRIM60P16-201ENST00000444048 694 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.03□□□□□ -1.44
COL5A1P20908 BZW1P1-201ENST00000454901 1240 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 RANP2-201ENST00000456833 229 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.03□□□□□ -1.44
COL5A1P20908 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.03□□□□□ -1.44
COL5A1P20908 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.03□□□□□ -1.44
COL5A1P20908 AC245014.3-201ENST00000618589 347 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 AC018445.2-201ENST00000622987 260 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 BIN2P1-201ENST00000504996 1530 ntBASIC6.03□□□□□ -1.44
COL5A1P20908 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.03□□□□□ -1.44
COL5A1P20908 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A1P20908 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL5A1P20908 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
COL5A1P20908 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.02□□□□□ -1.45
COL5A1P20908 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A1P20908 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
COL5A1P20908 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A1P20908 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL5A1P20908 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.02□□□□□ -1.45
COL5A1P20908 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.02□□□□□ -1.45
COL5A1P20908 AL355433.1-201ENST00000422804 300 ntBASIC6.02□□□□□ -1.45
COL5A1P20908 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.02□□□□□ -1.45
COL5A1P20908 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.02□□□□□ -1.45
COL5A1P20908 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.02□□□□□ -1.45
COL5A1P20908 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.02□□□□□ -1.45
COL5A1P20908 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.02□□□□□ -1.45
COL5A1P20908 AC073581.1-201ENST00000519036 575 ntBASIC6.02□□□□□ -1.45
COL5A1P20908 AP004607.6-201ENST00000525033 1202 ntBASIC6.02□□□□□ -1.45
COL5A1P20908 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.02□□□□□ -1.45
COL5A1P20908 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A1P20908 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.02□□□□□ -1.45
COL5A1P20908 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.02□□□□□ -1.45
COL5A1P20908 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.02□□□□□ -1.45
COL5A1P20908 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.02□□□□□ -1.45
COL5A1P20908 AC020765.1-201ENST00000604296 328 ntBASIC6.02□□□□□ -1.45
COL5A1P20908 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.02□□□□□ -1.45
COL5A1P20908 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A1P20908 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.02□□□□□ -1.45
COL5A1P20908 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.02□□□□□ -1.45
COL5A1P20908 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL5A1P20908 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL5A1P20908 AL031651.1-201ENST00000615357 1438 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms