Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC4P09017 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC4P09017 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC4P09017 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 AC097463.1-201ENST00000447288 481 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 AL451063.1-201ENST00000450164 1133 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC4P09017 SNX18P26-201ENST00000458433 740 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 AC009879.1-201ENST00000520029 839 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC4P09017 AP001437.1-201ENST00000608783 456 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 AL008723.3-201ENST00000608926 449 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 MIR7159-201ENST00000620587 66 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 AC012254.5-201ENST00000623573 478 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 AC073488.6-201ENST00000632293 754 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HOXC4P09017 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC4P09017 SPATA31C1-201ENST00000420021 3895 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HOXC4P09017 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC4P09017 HSPD1P9-201ENST00000420325 1636 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
HOXC4P09017 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 NBPF8-201ENST00000583271 5330 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC4P09017 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC4P09017 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 FUNDC2P3-201ENST00000334716 533 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 RN7SKP121-201ENST00000410842 305 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 GAPDHP34-201ENST00000432112 823 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 PSMD10P2-201ENST00000432890 672 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 AL138899.2-201ENST00000439139 499 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 AC009963.3-201ENST00000458090 486 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 AC073581.1-201ENST00000519036 575 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC4P09017 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC4P09017 AP001823.1-201ENST00000604056 1003 ntBASIC6.23□□□□□ -1.41
HOXC4P09017 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC4P09017 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC4P09017 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXC4P09017 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC4P09017 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC4P09017 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HOXC4P09017 AL359195.2-201ENST00000623657 4412 ntBASIC6.22□□□□□ -1.41
HOXC4P09017 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HOXC4P09017 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC4P09017 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC4P09017 AC005034.3-201ENST00000604845 1747 ntBASIC6.22□□□□□ -1.41
HOXC4P09017 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
HOXC4P09017 AL731556.1-201ENST00000394628 3711 ntBASIC6.22□□□□□ -1.41
HOXC4P09017 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC4P09017 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC4P09017 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms