Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 PSMC1P4-201ENST00000515236 1327 ntBASIC5.33□□□□□ -1.56
CD74P04233 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CD74P04233 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CD74P04233 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD74P04233 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD74P04233 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD74P04233 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CD74P04233 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD74P04233 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 AL391419.1-201ENST00000398901 1275 ntBASIC5.33□□□□□ -1.56
CD74P04233 RPL12P10-201ENST00000413498 498 ntBASIC5.33□□□□□ -1.56
CD74P04233 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.33□□□□□ -1.56
CD74P04233 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.33□□□□□ -1.56
CD74P04233 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.33□□□□□ -1.56
CD74P04233 CLIC4P3-201ENST00000422221 752 ntBASIC5.33□□□□□ -1.56
CD74P04233 MTND1P10-201ENST00000426108 832 ntBASIC5.33□□□□□ -1.56
CD74P04233 ETF1P1-206ENST00000427296 984 ntBASIC5.33□□□□□ -1.56
CD74P04233 RPL5P2-201ENST00000429598 854 ntBASIC5.33□□□□□ -1.56
CD74P04233 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.33□□□□□ -1.56
CD74P04233 USP24P1-201ENST00000433802 779 ntBASIC5.33□□□□□ -1.56
CD74P04233 KRT8P51-201ENST00000438938 274 ntBASIC5.33□□□□□ -1.56
CD74P04233 OR52U1P-201ENST00000439752 923 ntBASIC5.33□□□□□ -1.56
CD74P04233 GAPDHP33-201ENST00000443168 1013 ntBASIC5.33□□□□□ -1.56
CD74P04233 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.33□□□□□ -1.56
CD74P04233 AC126615.1-201ENST00000470084 630 ntBASIC5.33□□□□□ -1.56
CD74P04233 RPL5P15-201ENST00000475870 897 ntBASIC5.33□□□□□ -1.56
CD74P04233 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.33□□□□□ -1.56
CD74P04233 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.33□□□□□ -1.56
CD74P04233 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.33□□□□□ -1.56
CD74P04233 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.33□□□□□ -1.56
CD74P04233 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.33□□□□□ -1.56
CD74P04233 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.33□□□□□ -1.56
CD74P04233 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.33□□□□□ -1.56
CD74P04233 MIR4428-201ENST00000584884 73 ntBASIC5.33□□□□□ -1.56
CD74P04233 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.33□□□□□ -1.56
CD74P04233 ACTG1P22-201ENST00000603793 1099 ntBASIC5.33□□□□□ -1.56
CD74P04233 AC140479.4-205ENST00000636339 820 ntBASIC5.33□□□□□ -1.56
CD74P04233 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 AL731532.1-201ENST00000623972 4236 ntBASIC5.33□□□□□ -1.56
CD74P04233 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.33□□□□□ -1.56
CD74P04233 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.33□□□□□ -1.56
CD74P04233 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD74P04233 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 AC018628.1-201ENST00000624147 3819 ntBASIC5.32□□□□□ -1.56
CD74P04233 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
CD74P04233 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 RN7SKP257-201ENST00000364525 309 ntBASIC5.32□□□□□ -1.56
CD74P04233 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 AC074375.1-201ENST00000372993 192 ntBASIC5.32□□□□□ -1.56
CD74P04233 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CD74P04233 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CD74P04233 PDCL3P5-201ENST00000398028 722 ntBASIC5.32□□□□□ -1.56
CD74P04233 NPM1P37-201ENST00000403105 874 ntBASIC5.32□□□□□ -1.56
CD74P04233 RN7SKP268-201ENST00000411107 316 ntBASIC5.32□□□□□ -1.56
CD74P04233 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 SNX18P13-201ENST00000412442 529 ntBASIC5.32□□□□□ -1.56
CD74P04233 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.32□□□□□ -1.56
CD74P04233 AL354868.1-201ENST00000417077 482 ntBASIC5.32□□□□□ -1.56
CD74P04233 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 AL353803.3-201ENST00000444641 335 ntBASIC5.32□□□□□ -1.56
CD74P04233 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 AC106760.2-201ENST00000504159 619 ntBASIC5.32□□□□□ -1.56
CD74P04233 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 RN7SKP242-201ENST00000515967 289 ntBASIC5.32□□□□□ -1.56
CD74P04233 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 OR6M2P-201ENST00000529831 871 ntBASIC5.32□□□□□ -1.56
CD74P04233 AC103855.4-201ENST00000533158 265 ntBASIC5.32□□□□□ -1.56
CD74P04233 RPA2P3-201ENST00000533268 770 ntBASIC5.32□□□□□ -1.56
CD74P04233 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.32□□□□□ -1.56
CD74P04233 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD74P04233 AP000619.2-201ENST00000546014 969 ntBASIC5.32□□□□□ -1.56
CD74P04233 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.32□□□□□ -1.56
CD74P04233 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.32□□□□□ -1.56
CD74P04233 NPIPB1P-202ENST00000588786 828 ntBASIC5.32□□□□□ -1.56
CD74P04233 DIMT1P1-201ENST00000603970 763 ntBASIC5.32□□□□□ -1.56
CD74P04233 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.32□□□□□ -1.56
CD74P04233 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.32□□□□□ -1.56
CD74P04233 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms