Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.54□□□□□ -1.2
COL1A1P02452 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 AL157831.2-201ENST00000564681 3095 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
COL1A1P02452 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
COL1A1P02452 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.54□□□□□ -1.2
COL1A1P02452 PPIAP10-201ENST00000438675 458 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 AC016908.1-201ENST00000442571 1219 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 GAPDHP23-201ENST00000444823 993 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 AC011476.1-201ENST00000466725 307 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 PSMA2P2-201ENST00000504319 686 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 OR5H7P-201ENST00000514084 930 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.54□□□□□ -1.2
COL1A1P02452 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
COL1A1P02452 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
COL1A1P02452 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.54□□□□□ -1.2
COL1A1P02452 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.54□□□□□ -1.2
COL1A1P02452 AC127024.6-201ENST00000621598 424 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
COL1A1P02452 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
COL1A1P02452 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 TNPO1P2-201ENST00000426249 2665 ntBASIC7.54□□□□□ -1.2
COL1A1P02452 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL1A1P02452 AC022325.1-201ENST00000502748 2199 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
COL1A1P02452 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.53□□□□□ -1.2
COL1A1P02452 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
COL1A1P02452 RAD17P2-201ENST00000451754 1977 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL1A1P02452 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL1A1P02452 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL1A1P02452 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
COL1A1P02452 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.53□□□□□ -1.2
COL1A1P02452 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL1A1P02452 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL1A1P02452 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.53□□□□□ -1.2
COL1A1P02452 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.53□□□□□ -1.2
COL1A1P02452 Y_RNA.667-201ENST00000516212 107 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.53□□□□□ -1.2
COL1A1P02452 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.53□□□□□ -1.2
COL1A1P02452 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.53□□□□□ -1.2
COL1A1P02452 AL445647.2-201ENST00000615170 130 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 AL445649.1-201ENST00000615941 691 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 AC126175.1-201ENST00000617041 758 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 AC245014.3-201ENST00000618589 347 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.53□□□□□ -1.2
COL1A1P02452 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL1A1P02452 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.53□□□□□ -1.2
COL1A1P02452 FO082842.1-201ENST00000423552 1370 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 AC011416.1-201ENST00000514947 1732 ntBASIC7.53□□□□□ -1.2
COL1A1P02452 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
COL1A1P02452 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL1A1P02452 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
COL1A1P02452 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
COL1A1P02452 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 AC024651.2-201ENST00000562480 2098 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL1A1P02452 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL1A1P02452 TMSB4XP4-201ENST00000323496 618 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 RNU1-150P-201ENST00000362491 162 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 AL132875.1-201ENST00000403623 949 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 SNX18P26-201ENST00000458433 740 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.52□□□□□ -1.21
COL1A1P02452 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.52□□□□□ -1.21
COL1A1P02452 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.52□□□□□ -1.21
COL1A1P02452 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.52□□□□□ -1.21
COL1A1P02452 AC092681.3-201ENST00000609463 678 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 MIR6809-201ENST00000612189 116 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 AL132640.3-201ENST00000630473 177 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.52□□□□□ -1.21
COL1A1P02452 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL1A1P02452 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
COL1A1P02452 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL1A1P02452 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL1A1P02452 AL731556.1-201ENST00000394628 3711 ntBASIC7.52□□□□□ -1.21
COL1A1P02452 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL1A1P02452 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.52□□□□□ -1.21
COL1A1P02452 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL1A1P02452 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
COL1A1P02452 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms