Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.04□□□□□ -1.6
SSSCA1O60232 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.04□□□□□ -1.6
SSSCA1O60232 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.04□□□□□ -1.6
SSSCA1O60232 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSSCA1O60232 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.04□□□□□ -1.6
SSSCA1O60232 RAB28P2-201ENST00000454299 641 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 RANP2-201ENST00000456833 229 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.04□□□□□ -1.6
SSSCA1O60232 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.04□□□□□ -1.6
SSSCA1O60232 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSSCA1O60232 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.04□□□□□ -1.6
SSSCA1O60232 AC139713.1-202ENST00000512366 460 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
SSSCA1O60232 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.04□□□□□ -1.6
SSSCA1O60232 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.04□□□□□ -1.6
SSSCA1O60232 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SSSCA1O60232 AC011193.2-201ENST00000582638 367 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 AC020916.2-201ENST00000591242 360 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.04□□□□□ -1.6
SSSCA1O60232 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.04□□□□□ -1.6
SSSCA1O60232 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSSCA1O60232 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.04□□□□□ -1.6
SSSCA1O60232 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSSCA1O60232 AC089998.1-201ENST00000548575 3141 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSSCA1O60232 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSSCA1O60232 OFD1P17-201ENST00000437639 3018 ntBASIC5.04□□□□□ -1.6
SSSCA1O60232 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSSCA1O60232 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AC138907.8-201ENST00000623981 2256 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 AL355834.1-201ENST00000556602 3965 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 RNU1-56P-201ENST00000391303 164 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AL662791.3-201ENST00000413771 776 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AL354707.3-201ENST00000427308 331 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSSCA1O60232 USP24P1-201ENST00000433802 779 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 ATP5LP4-201ENST00000434169 307 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SSSCA1O60232 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AC016908.1-201ENST00000442571 1219 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.03□□□□□ -1.6
SSSCA1O60232 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 CCNJP1-201ENST00000450600 1149 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.03□□□□□ -1.6
SSSCA1O60232 RN7SL456P-201ENST00000469290 295 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 RN7SL91P-201ENST00000469313 291 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 RN7SL776P-201ENST00000493390 268 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 ST13P12-201ENST00000508958 1094 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AL121782.1-201ENST00000611242 413 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 AC127071.2-201ENST00000623293 527 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 RBPJP6-201ENST00000411556 1431 ntBASIC5.03□□□□□ -1.6
SSSCA1O60232 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.03□□□□□ -1.6
SSSCA1O60232 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSSCA1O60232 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SSSCA1O60232 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.03□□□□□ -1.6
SSSCA1O60232 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 AC007998.4-201ENST00000612496 2533 ntBASIC5.02□□□□□ -1.61
SSSCA1O60232 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SSSCA1O60232 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.02□□□□□ -1.61
SSSCA1O60232 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.02□□□□□ -1.61
SSSCA1O60232 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSSCA1O60232 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms