Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPK1AO00322 SMG1P5-202ENST00000529428 4219 ntBASIC5.98□□□□□ -1.45
UPK1AO00322 SMG1P2-201ENST00000566127 4221 ntBASIC5.98□□□□□ -1.45
UPK1AO00322 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.98□□□□□ -1.45
UPK1AO00322 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPK1AO00322 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPK1AO00322 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPK1AO00322 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
UPK1AO00322 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.97□□□□□ -1.45
UPK1AO00322 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
UPK1AO00322 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
UPK1AO00322 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
UPK1AO00322 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.97□□□□□ -1.45
UPK1AO00322 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 SNORD16-201ENST00000362803 99 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 VIM2P-201ENST00000402383 1294 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 AC128677.1-201ENST00000436016 442 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.97□□□□□ -1.45
UPK1AO00322 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.97□□□□□ -1.45
UPK1AO00322 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 COX6B1P4-201ENST00000519826 484 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 AC008429.4-201ENST00000521201 182 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 RPL41P2-201ENST00000544920 409 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.97□□□□□ -1.45
UPK1AO00322 HMGN1P26-201ENST00000558737 303 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.97□□□□□ -1.45
UPK1AO00322 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 MIR4732-201ENST00000581873 76 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.97□□□□□ -1.45
UPK1AO00322 RN7SL475P-201ENST00000583379 298 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.97□□□□□ -1.45
UPK1AO00322 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.97□□□□□ -1.45
UPK1AO00322 AL008723.3-201ENST00000608926 449 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 AL589743.6-201ENST00000611025 117 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 MIR6885-201ENST00000612241 66 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 AC211486.4-201ENST00000621495 113 ntBASIC5.97□□□□□ -1.45
UPK1AO00322 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.97□□□□□ -1.45
UPK1AO00322 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPK1AO00322 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
UPK1AO00322 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.96□□□□□ -1.45
UPK1AO00322 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
UPK1AO00322 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
UPK1AO00322 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
UPK1AO00322 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
UPK1AO00322 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
UPK1AO00322 RNA5SP514-201ENST00000363717 111 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 RNA5SP478-201ENST00000364657 115 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
UPK1AO00322 RN7SKP129-201ENST00000410288 299 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 AC015977.1-201ENST00000418887 292 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.96□□□□□ -1.46
UPK1AO00322 AC079922.1-201ENST00000443291 359 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 AL031681.1-201ENST00000443304 400 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 AL445991.1-201ENST00000450381 475 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 AL445687.2-201ENST00000458156 728 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 AC128716.1-201ENST00000475129 166 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 AC008945.1-201ENST00000505144 499 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.96□□□□□ -1.46
UPK1AO00322 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.96□□□□□ -1.46
UPK1AO00322 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.96□□□□□ -1.46
UPK1AO00322 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.96□□□□□ -1.46
UPK1AO00322 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.96□□□□□ -1.46
UPK1AO00322 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 AC009831.5-201ENST00000624000 3189 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 AC125238.2-201ENST00000430003 1440 ntBASIC5.96□□□□□ -1.46
UPK1AO00322 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
UPK1AO00322 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.96□□□□□ -1.46
UPK1AO00322 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPK1AO00322 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms