Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC096741.1-201ENST00000472250 846 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AC022215.1-201ENST00000481770 362 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AL049779.2-201ENST00000553847 315 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AL023583.1-201ENST00000607518 1143 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AC096861.1-201ENST00000616652 240 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 MIR6758-201ENST00000620653 63 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AP002505.2-201ENST00000623585 696 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 CD86-209ENST00000493101 1572 ntTSL 2 BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 AC100871.1-201ENST00000507871 1456 ntBASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC9.69□□□□□ -0.86
RIMBP3Q9UFD9 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 AL022331.1-201ENST00000429025 477 ntBASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 AL035090.1-201ENST00000454835 332 ntBASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 AC091180.1-201ENST00000462104 372 ntBASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 RN7SL604P-201ENST00000492589 296 ntBASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 IGLV3-30-201ENST00000524362 298 ntBASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 OR5AZ1P-201ENST00000527448 943 ntBASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 HMGB1P42-201ENST00000532126 553 ntBASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC9.68□□□□□ -0.86
RIMBP3Q9UFD9 Y_RNA.126-201ENST00000363382 111 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 SNORA43.1-201ENST00000364863 140 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 RNA5SP87-201ENST00000384155 118 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 CYCSP6-201ENST00000434498 302 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AC092647.3-201ENST00000443044 633 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 MORF4-201ENST00000447135 971 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 BNIP3P22-201ENST00000593399 556 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AC068831.8-201ENST00000620171 435 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 EPS15P1-202ENST00000459691 2071 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 RNA5SP305-201ENST00000362665 119 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AC068538.1-201ENST00000376856 336 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AL161747.1-201ENST00000480068 358 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 EIF1P7-201ENST00000487533 337 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AC008897.1-201ENST00000494006 347 ntBASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RIMBP3Q9UFD9 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
RIMBP3Q9UFD9 OR4C1P-202ENST00000641065 1569 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms