Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RPL11P4-201ENST00000332269 436 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RNU1-65P-201ENST00000363919 148 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 MTND4LP17-201ENST00000414607 293 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 Z68868.1-201ENST00000429048 544 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RN7SL552P-201ENST00000462094 276 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RPL23AP64-201ENST00000469465 435 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 GM2AP2-201ENST00000491764 562 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RPL37P23-201ENST00000492641 294 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 AC113367.2-201ENST00000505749 160 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 AC023968.1-201ENST00000560719 475 ntBASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 MED28P4-201ENST00000433137 572 ntBASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 OR2L9P-201ENST00000444456 913 ntBASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AC083906.1-201ENST00000509298 406 ntBASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AC008055.1-201ENST00000547032 609 ntBASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AL589863.1-201ENST00000595383 631 ntBASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AC091193.1-201ENST00000604640 448 ntBASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 RPL31P11-201ENST00000426558 1558 ntBASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.61□□□□□ -1.19
CLIP2Q9UDT6 AL355377.1-201ENST00000621125 1653 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC011504.1-201ENST00000623331 4103 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 MIR621-201ENST00000384919 96 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 RAB5CP1-201ENST00000395972 580 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 VN1R12P-201ENST00000403778 876 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 GAPDHP59-201ENST00000435908 267 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 GTF2IP14-201ENST00000441415 586 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 PCNPP2-201ENST00000441651 455 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC021006.1-201ENST00000489849 553 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 RPL17P2-201ENST00000491913 451 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 RNA5SP441-201ENST00000516809 88 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 IGHV3-57-201ENST00000520143 280 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AL953862.2-201ENST00000603089 820 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC012653.2-201ENST00000621880 420 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 SNX18P3-202ENST00000565670 1750 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms