Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNA5SP116-201ENST00000516132 98 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC092718.4-201ENST00000566639 716 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC211486.4-201ENST00000621495 113 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AL138693.1-201ENST00000622219 129 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AL662795.2-201ENST00000624252 3706 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC005225.5-201ENST00000623547 2225 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 RNA5SP478-201ENST00000364657 115 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AL391419.1-201ENST00000398901 1275 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 RPEP4-201ENST00000437636 602 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 GAPDHP37-201ENST00000442317 968 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 OR13K1P-201ENST00000444577 975 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC103563.5-201ENST00000455643 364 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 RPL5P12-201ENST00000477071 851 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 MTND6P8-201ENST00000503471 522 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC106800.3-201ENST00000511389 308 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AP001804.1-201ENST00000526868 919 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 OR4A40P-201ENST00000533878 948 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 OR4H6P-201ENST00000563771 921 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 MTATP6P25-201ENST00000574491 261 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AL008582.1-201ENST00000609612 442 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 MIR6885-201ENST00000612241 66 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AP003789.1-201ENST00000617737 605 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC068213.1-201ENST00000625124 226 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 AC022726.2-201ENST00000634673 547 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 SHQ1P1-201ENST00000437111 1544 ntBASIC6.6□□□□□ -1.35
PCDH9Q9HC56 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH9Q9HC56 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 UBTFL2-201ENST00000411859 1191 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC017035.1-201ENST00000411999 1115 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL031681.1-201ENST00000443304 400 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL020997.1-201ENST00000446554 349 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC092967.1-201ENST00000449016 481 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL445991.1-201ENST00000450381 475 ntBASIC6.59□□□□□ -1.35
PCDH9Q9HC56 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDH9Q9HC56 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms