Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF31Q96EP0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF31Q96EP0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF31Q96EP0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF31Q96EP0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF31Q96EP0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF31Q96EP0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RNF31Q96EP0 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF31Q96EP0 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC090181.3-201ENST00000624777 1514 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 OR4K17-201ENST00000315543 1032 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 RNA5SP382-201ENST00000363355 112 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 RAB5CP1-201ENST00000395972 580 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL359715.1-201ENST00000404330 555 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 MIR1204-201ENST00000408388 67 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 RNU6-584P-201ENST00000410350 95 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 UBTFL2-201ENST00000411859 1191 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL773545.3-201ENST00000414297 706 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 CDC42P6-201ENST00000421246 576 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 MTCO2P1-201ENST00000424648 477 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 USP12PY-201ENST00000427677 1064 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 OR52E7P-201ENST00000452394 933 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AP002371.1-201ENST00000463604 433 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC104339.1-201ENST00000465478 348 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 RPL5P12-201ENST00000477071 851 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC096743.1-201ENST00000485172 319 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC140063.1-201ENST00000541343 259 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 PRR13P5-201ENST00000596581 442 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC068726.1-201ENST00000610993 341 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC004241.2-201ENST00000614562 444 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 AL163051.2-201ENST00000618976 735 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 AC068057.2-201ENST00000624047 895 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 CASC19-261ENST00000641853 1638 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 CUBNP3-201ENST00000457461 1784 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 PPBPP2-201ENST00000513150 1362 ntBASIC6.57□□□□□ -1.36
RNF31Q96EP0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF31Q96EP0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF31Q96EP0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RNF31Q96EP0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF31Q96EP0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RNF31Q96EP0 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF31Q96EP0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF31Q96EP0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms