Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.73□□□□□ -1.49
RFT1Q96AA3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.73□□□□□ -1.49
RFT1Q96AA3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RFT1Q96AA3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RFT1Q96AA3 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.73□□□□□ -1.49
RFT1Q96AA3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFT1Q96AA3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.73□□□□□ -1.49
RFT1Q96AA3 ZNF806-201ENST00000438300 1774 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 RPL23AP17-201ENST00000401064 499 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 SNORA11D-201ENST00000408548 128 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 SNORA11E-201ENST00000408778 128 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL662791.3-201ENST00000413771 776 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 RPS7P12-201ENST00000422385 582 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 Z68868.1-201ENST00000429048 544 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC027124.1-201ENST00000440852 466 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL354714.5-201ENST00000450131 590 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC126615.1-201ENST00000470084 630 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 RN7SL390P-201ENST00000470634 284 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 OR2A3P-201ENST00000493774 953 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 RN7SL104P-201ENST00000498686 293 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 ASNSP4-201ENST00000511103 447 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC017007.1-201ENST00000511960 415 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC008676.3-201ENST00000521237 435 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 VDAC2P2-201ENST00000544463 901 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL590032.1-201ENST00000604920 252 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC025171.4-201ENST00000607250 1047 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AL121936.2-201ENST00000641935 662 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 AC015799.1-201ENST00000622996 3122 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 QRSL1P3-201ENST00000552666 1316 ntBASIC5.72□□□□□ -1.49
RFT1Q96AA3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RFT1Q96AA3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFT1Q96AA3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.71□□□□□ -1.49
RFT1Q96AA3 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RFT1Q96AA3 ZNF101P1-201ENST00000435701 1720 ntBASIC5.71□□□□□ -1.49
RFT1Q96AA3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 TRIM53CP-201ENST00000531490 1354 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC005725.1-201ENST00000577346 2607 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFT1Q96AA3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFT1Q96AA3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 RNU11-201ENST00000387069 134 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 NPM1P37-201ENST00000403105 874 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC091492.1-201ENST00000419844 272 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC114402.2-201ENST00000432760 643 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms