Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 uc_338.18-201ENST00000615451 175 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL445649.1-201ENST00000615941 691 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC105046.1-201ENST00000566457 4997 ntBASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
ALMS1Q8TCU4 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 RNA5SP394-201ENST00000364216 119 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 KIF4CP-201ENST00000422742 1279 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 IGLV3-4-201ENST00000432300 244 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC012075.1-201ENST00000436549 580 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 RPS26P41-201ENST00000450370 284 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC098847.1-201ENST00000473094 348 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 SUGT1P3-202ENST00000604259 383 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC068870.2-201ENST00000620635 389 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC119674.1-202ENST00000641333 1860 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 U8.4-201ENST00000363626 134 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 GAPDHP23-201ENST00000444823 993 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC103563.5-201ENST00000455643 364 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 HAUS8P1-201ENST00000549005 542 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 CR383656.6-201ENST00000550518 394 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL953862.2-201ENST00000603089 820 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL137067.2-201ENST00000621202 131 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC008957.3-201ENST00000624112 2242 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 RANP1-206ENST00000455094 651 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL133445.1-201ENST00000467051 452 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 WBP1LP3-201ENST00000523033 208 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC005244.1-201ENST00000582566 339 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC007204.2-201ENST00000615022 616 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC010624.4-201ENST00000597606 1351 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 NHS-204ENST00000615422 8860 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 CTNNA1P1-201ENST00000515849 2728 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms