Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RAPH1Q70E73 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RAPH1Q70E73 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RAPH1Q70E73 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RAPH1Q70E73 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.48□□□□□ -1.37
RAPH1Q70E73 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RAPH1Q70E73 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 GTF2IP4-201ENST00000453092 2054 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 RNA5SP429-201ENST00000363688 109 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 SNORD8-201ENST00000363915 110 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 RNA5SP355-201ENST00000365317 135 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AL589994.1-201ENST00000404962 340 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 CHCHD4P5-201ENST00000436684 427 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 MTND6P5-201ENST00000448266 512 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC114940.1-201ENST00000512162 1265 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AP001994.1-201ENST00000527539 826 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 RN7SL689P-201ENST00000577215 297 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 RN7SL208P-201ENST00000577964 296 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC091133.5-201ENST00000603088 301 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AL353807.4-201ENST00000604995 257 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC093635.1-201ENST00000609028 555 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AL138960.1-201ENST00000613838 513 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC116165.3-201ENST00000614524 400 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC127071.2-201ENST00000623293 527 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC011369.2-201ENST00000624423 1567 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 PSMC1P4-201ENST00000515236 1327 ntBASIC6.47□□□□□ -1.37
RAPH1Q70E73 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RAPH1Q70E73 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.47□□□□□ -1.37
RAPH1Q70E73 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RAPH1Q70E73 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RAPH1Q70E73 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
RAPH1Q70E73 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
RAPH1Q70E73 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
RAPH1Q70E73 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
RAPH1Q70E73 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RAPH1Q70E73 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RAPH1Q70E73 DDX18P6-201ENST00000450119 1997 ntBASIC6.46□□□□□ -1.37
RAPH1Q70E73 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RAPH1Q70E73 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RAPH1Q70E73 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 EEF1GP6-201ENST00000402309 905 ntBASIC6.46□□□□□ -1.38
RAPH1Q70E73 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 AL359092.1-201ENST00000417156 265 ntBASIC6.46□□□□□ -1.38
RAPH1Q70E73 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RAPH1Q70E73 CYCSP52-201ENST00000422857 310 ntBASIC6.46□□□□□ -1.38
RAPH1Q70E73 AC095038.1-201ENST00000429248 1591 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms