Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 EML5-201ENST00000380664 5910 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 RNA5SP507-201ENST00000363603 121 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 RNU1-46P-201ENST00000384425 164 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 AL645733.1-201ENST00000402250 217 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 MIR1286-201ENST00000408112 78 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 RN7SKP29-201ENST00000410957 272 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 FAR2P2-201ENST00000413041 594 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 RPS7P8-201ENST00000418311 581 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 FAR2P4-202ENST00000425399 584 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 FAR2P1-206ENST00000449736 709 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 AC092324.1-201ENST00000468671 324 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 OFD1P10Y-201ENST00000434110 1433 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 HIGD1AP8-201ENST00000453927 274 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 RPSAP50-201ENST00000481955 852 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 AL589647.1-201ENST00000402485 466 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 RN7SL165P-201ENST00000477476 291 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 RPA2P3-201ENST00000533268 770 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 AC126177.5-201ENST00000549599 178 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 MIR6820-201ENST00000611508 62 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 MIR199B-201ENST00000384849 110 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 AL360271.1-201ENST00000395679 510 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 DUTP4-201ENST00000424782 475 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 AC073610.1-201ENST00000489971 396 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 AC093890.1-201ENST00000502554 540 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 OR51A1P-201ENST00000511110 946 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 MIR7703-201ENST00000620784 77 ntBASIC4.9□□□□□ -1.62
VPS13CQ709C8 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
VPS13CQ709C8 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS13CQ709C8 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS13CQ709C8 RNU4ATAC2P-201ENST00000408674 126 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS13CQ709C8 AL662874.1-201ENST00000426065 230 ntBASIC4.9□□□□□ -1.63
VPS13CQ709C8 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms