Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC093870.1-201ENST00000506837 213 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 SNORA81.2-201ENST00000516868 170 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 IGHV3-57-201ENST00000520143 280 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AP003115.1-201ENST00000569849 463 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AL953862.2-201ENST00000603089 820 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC068726.1-201ENST00000610993 341 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC004241.2-201ENST00000614562 444 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 AC018659.2-201ENST00000624690 715 ntBASIC6.09□□□□□ -1.43
RTL4Q6ZR62 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTL4Q6ZR62 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RTL4Q6ZR62 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RTL4Q6ZR62 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.09□□□□□ -1.44
RTL4Q6ZR62 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
RTL4Q6ZR62 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 FAM32BP-201ENST00000344033 333 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 RNA5SP188-201ENST00000362916 129 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 SETP9-201ENST00000423837 832 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 GPN3P1-201ENST00000423883 535 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 OR6R1P-201ENST00000431838 940 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CLNS1AP1-201ENST00000435954 682 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 IGLV3-6-201ENST00000523937 250 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC092718.4-201ENST00000566639 716 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC025283.1-201ENST00000572039 734 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AL049840.5-201ENST00000602827 552 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AL583832.1-201ENST00000603227 784 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC097467.4-201ENST00000605504 141 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 SNORD96A-201ENST00000606577 79 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 MIR6889-201ENST00000613185 59 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC012653.2-201ENST00000621880 420 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 AC012254.5-201ENST00000623573 478 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 DNM1P47-203ENST00000571780 12667 ntBASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTL4Q6ZR62 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTL4Q6ZR62 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms