Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC009452.1-201ENST00000640823 606 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 LINC01616-201ENST00000561816 2280 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 EPS15P1-202ENST00000459691 2071 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 SNORA70H-201ENST00000383910 135 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 SNORA70J-201ENST00000384182 135 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 SNORA40.4-201ENST00000390971 128 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC245036.1-201ENST00000391727 309 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 MIR1266-201ENST00000408125 84 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC007568.1-201ENST00000422912 471 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 TAAR4P-201ENST00000454843 1039 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 RN7SL267P-201ENST00000485107 261 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 MTND3P3-201ENST00000505004 126 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 IGHV1-14-201ENST00000523391 241 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC084851.2-201ENST00000530377 364 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 MIR5010-201ENST00000582846 120 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC004836.1-201ENST00000623032 634 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AC020923.1-201ENST00000624021 917 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 AL138960.2-201ENST00000625145 535 ntBASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.34□□□□□ -1.39
ZNF549Q6P9A3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ZNF549Q6P9A3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.34□□□□□ -1.4
ZNF549Q6P9A3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC093829.1-201ENST00000506662 1618 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC011369.2-201ENST00000624423 1567 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 RNA5SP85-201ENST00000365378 119 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AP003170.5-201ENST00000397185 335 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 RN7SKP221-201ENST00000410420 301 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 MTND2P12-201ENST00000417560 1252 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 NPM1P9-201ENST00000453156 844 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC131935.1-201ENST00000524621 333 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC027796.1-201ENST00000575593 512 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 PRELID3BP3-201ENST00000584963 545 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AL591222.2-201ENST00000604443 754 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms