Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 KARSP1-201ENST00000451871 1752 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.33□□□□□ -1.24
CCNA1P78396 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 ATP5LP2-201ENST00000440646 311 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 AL359839.1-201ENST00000451975 1160 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.33□□□□□ -1.24
CCNA1P78396 AC022415.1-202ENST00000486612 523 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.33□□□□□ -1.24
CCNA1P78396 AC060775.1-201ENST00000518241 520 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.33□□□□□ -1.24
CCNA1P78396 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.33□□□□□ -1.24
CCNA1P78396 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.33□□□□□ -1.24
CCNA1P78396 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.33□□□□□ -1.24
CCNA1P78396 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.33□□□□□ -1.24
CCNA1P78396 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.33□□□□□ -1.24
CCNA1P78396 LINC00556-201ENST00000569603 412 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 RN7SL475P-201ENST00000583379 298 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 AC004801.6-201ENST00000616571 978 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 AC009237.3-203ENST00000442128 3551 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.33□□□□□ -1.24
CCNA1P78396 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.33□□□□□ -1.24
CCNA1P78396 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCNA1P78396 CASC19-238ENST00000641523 1558 ntBASIC7.33□□□□□ -1.24
CCNA1P78396 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.33□□□□□ -1.24
CCNA1P78396 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.32□□□□□ -1.24
CCNA1P78396 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.32□□□□□ -1.24
CCNA1P78396 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 MORF4L1P5-201ENST00000433352 961 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 RPL23AP64-201ENST00000469465 435 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 RN7SL326P-201ENST00000477493 296 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 SNORA81.2-201ENST00000516868 170 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.32□□□□□ -1.24
CCNA1P78396 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.32□□□□□ -1.24
CCNA1P78396 AC011445.2-201ENST00000599274 173 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 AL157899.1-201ENST00000604110 936 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 AC005393.1-201ENST00000617916 584 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 OR1N1-202ENST00000619659 939 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 MIR8089-201ENST00000620165 82 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
CCNA1P78396 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 SALL4P7-201ENST00000555779 3120 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.32□□□□□ -1.24
CCNA1P78396 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.32□□□□□ -1.24
CCNA1P78396 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CCNA1P78396 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CCNA1P78396 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCNA1P78396 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.32□□□□□ -1.24
CCNA1P78396 AC007485.2-201ENST00000623493 1667 ntBASIC7.32□□□□□ -1.24
CCNA1P78396 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.31□□□□□ -1.24
CCNA1P78396 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.31□□□□□ -1.24
CCNA1P78396 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.31□□□□□ -1.24
CCNA1P78396 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 SUGT1P2-201ENST00000379452 992 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.31□□□□□ -1.24
CCNA1P78396 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.31□□□□□ -1.24
CCNA1P78396 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.31□□□□□ -1.24
CCNA1P78396 AC130360.1-201ENST00000425489 1117 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.31□□□□□ -1.24
CCNA1P78396 AL391987.1-201ENST00000441025 200 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 AL133351.3-201ENST00000454998 193 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 RN7SL561P-201ENST00000488553 281 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms