Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.59□□□□□ -1.35
CDH6P55285 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 SNORA70H-201ENST00000383910 135 ntBASIC6.59□□□□□ -1.35
CDH6P55285 SNORA70J-201ENST00000384182 135 ntBASIC6.59□□□□□ -1.35
CDH6P55285 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CDH6P55285 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.59□□□□□ -1.35
CDH6P55285 GPN3P1-201ENST00000423883 535 ntBASIC6.59□□□□□ -1.35
CDH6P55285 AC128677.1-201ENST00000436016 442 ntBASIC6.59□□□□□ -1.35
CDH6P55285 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
CDH6P55285 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH6P55285 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH6P55285 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH6P55285 VPS25P1-201ENST00000455691 508 ntBASIC6.59□□□□□ -1.35
CDH6P55285 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH6P55285 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 RNA5SP418-201ENST00000515951 117 ntBASIC6.59□□□□□ -1.35
CDH6P55285 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH6P55285 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH6P55285 AC037479.1-201ENST00000558361 625 ntBASIC6.59□□□□□ -1.35
CDH6P55285 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.59□□□□□ -1.35
CDH6P55285 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.59□□□□□ -1.35
CDH6P55285 RN7SL66P-201ENST00000582099 264 ntBASIC6.59□□□□□ -1.35
CDH6P55285 AL137246.2-201ENST00000613439 662 ntBASIC6.59□□□□□ -1.35
CDH6P55285 AC022726.2-201ENST00000634673 547 ntBASIC6.59□□□□□ -1.35
CDH6P55285 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH6P55285 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH6P55285 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CDH6P55285 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CDH6P55285 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH6P55285 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CDH6P55285 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CDH6P55285 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CDH6P55285 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.59□□□□□ -1.36
CDH6P55285 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CDH6P55285 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.58□□□□□ -1.36
CDH6P55285 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH6P55285 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH6P55285 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CDH6P55285 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CDH6P55285 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH6P55285 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.58□□□□□ -1.36
CDH6P55285 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH6P55285 AC116036.1-201ENST00000412199 367 ntBASIC6.58□□□□□ -1.36
CDH6P55285 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH6P55285 OR6R1P-201ENST00000431838 940 ntBASIC6.58□□□□□ -1.36
CDH6P55285 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH6P55285 GTF3AP6-201ENST00000432585 986 ntBASIC6.58□□□□□ -1.36
CDH6P55285 GTF2IP14-201ENST00000441415 586 ntBASIC6.58□□□□□ -1.36
CDH6P55285 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH6P55285 CEACAMP11-201ENST00000455211 583 ntBASIC6.58□□□□□ -1.36
CDH6P55285 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 RN7SL714P-201ENST00000487050 298 ntBASIC6.58□□□□□ -1.36
CDH6P55285 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH6P55285 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH6P55285 RPL41P2-201ENST00000544920 409 ntBASIC6.58□□□□□ -1.36
CDH6P55285 AC009729.1-201ENST00000548873 1133 ntBASIC6.58□□□□□ -1.36
CDH6P55285 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.58□□□□□ -1.36
CDH6P55285 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.58□□□□□ -1.36
CDH6P55285 MIR3157-201ENST00000578688 85 ntBASIC6.58□□□□□ -1.36
CDH6P55285 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.58□□□□□ -1.36
CDH6P55285 MIR212-201ENST00000586026 110 ntBASIC6.58□□□□□ -1.36
CDH6P55285 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.58□□□□□ -1.36
CDH6P55285 AL589863.1-201ENST00000595383 631 ntBASIC6.58□□□□□ -1.36
CDH6P55285 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH6P55285 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CDH6P55285 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.58□□□□□ -1.36
CDH6P55285 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH6P55285 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH6P55285 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH6P55285 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.57□□□□□ -1.36
CDH6P55285 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH6P55285 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH6P55285 AL356121.1-201ENST00000442911 156 ntBASIC6.57□□□□□ -1.36
CDH6P55285 OR13K1P-201ENST00000444577 975 ntBASIC6.57□□□□□ -1.36
CDH6P55285 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH6P55285 AL022237.1-201ENST00000446663 358 ntBASIC6.57□□□□□ -1.36
CDH6P55285 RPS18P1-201ENST00000447840 458 ntBASIC6.57□□□□□ -1.36
CDH6P55285 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms