Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK2P53671 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK2P53671 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
LIMK2P53671 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK2P53671 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 TMCC1P1-201ENST00000518897 1980 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LIMK2P53671 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LIMK2P53671 VN1R12P-201ENST00000403778 876 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 AC116036.1-201ENST00000412199 367 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK2P53671 RPSAP32-201ENST00000432681 526 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK2P53671 AC092106.2-201ENST00000436597 487 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 UBBP5-201ENST00000446970 266 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 EEF1B2P3-201ENST00000447718 678 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 RPL5P14-201ENST00000494197 878 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK2P53671 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK2P53671 AC093816.1-201ENST00000515076 913 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 MIR4271-201ENST00000582451 67 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.48□□□□□ -1.37
LIMK2P53671 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 AC012676.3-201ENST00000614983 479 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 AL591926.1-201ENST00000620542 217 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK2P53671 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 MAPK10-270ENST00000641102 3538 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 MTND5P12-201ENST00000502851 1449 ntBASIC6.48□□□□□ -1.37
LIMK2P53671 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK2P53671 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK2P53671 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK2P53671 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK2P53671 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK2P53671 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 ABCA11P-202ENST00000504019 2110 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
LIMK2P53671 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK2P53671 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 RNA5SP251-201ENST00000410614 137 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 U3.43-201ENST00000410734 213 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 RPS21P8-201ENST00000413365 247 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
LIMK2P53671 GPN3P1-201ENST00000423883 535 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK2P53671 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC118758.1-202ENST00000454719 225 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK2P53671 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK2P53671 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK2P53671 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK2P53671 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LIMK2P53671 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK2P53671 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK2P53671 RN7SL230P-201ENST00000580835 303 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK2P53671 AC114477.1-201ENST00000605097 605 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 AL137246.2-201ENST00000613439 662 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 uc_338.29-201ENST00000615099 168 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 AL445649.1-201ENST00000615941 691 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 MIR6806-201ENST00000622141 64 ntBASIC6.47□□□□□ -1.37
LIMK2P53671 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK2P53671 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK2P53671 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK2P53671 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms