Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 STAG3L4-201ENST00000352103 530 ntBASIC5.83□□□□□ -1.48
SOX2P48431 RNU6-697P-201ENST00000363348 107 ntBASIC5.83□□□□□ -1.48
SOX2P48431 RN7SKP118-201ENST00000364331 330 ntBASIC5.83□□□□□ -1.48
SOX2P48431 U3.14-201ENST00000365363 227 ntBASIC5.83□□□□□ -1.48
SOX2P48431 RNU1-55P-201ENST00000365510 158 ntBASIC5.83□□□□□ -1.48
SOX2P48431 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 RNU6-40P-201ENST00000384254 107 ntBASIC5.83□□□□□ -1.48
SOX2P48431 RNU1-46P-201ENST00000384425 164 ntBASIC5.83□□□□□ -1.48
SOX2P48431 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SOX2P48431 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 ELOCP3-201ENST00000439303 348 ntBASIC5.83□□□□□ -1.48
SOX2P48431 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 SNORA35.1-201ENST00000458908 128 ntBASIC5.83□□□□□ -1.48
SOX2P48431 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 RPSAP48-201ENST00000466509 889 ntBASIC5.83□□□□□ -1.48
SOX2P48431 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 RPL23AP73-201ENST00000492507 471 ntBASIC5.83□□□□□ -1.48
SOX2P48431 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.83□□□□□ -1.48
SOX2P48431 RPEP1-201ENST00000504507 658 ntBASIC5.83□□□□□ -1.48
SOX2P48431 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 SCARNA18.2-201ENST00000516882 84 ntBASIC5.83□□□□□ -1.48
SOX2P48431 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.83□□□□□ -1.48
SOX2P48431 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 MIR4786-201ENST00000583954 80 ntBASIC5.83□□□□□ -1.48
SOX2P48431 MIMT1-201ENST00000597105 1050 ntBASIC5.83□□□□□ -1.48
SOX2P48431 ZNF92P2-201ENST00000600543 1059 ntBASIC5.83□□□□□ -1.48
SOX2P48431 AL158050.2-201ENST00000605336 568 ntBASIC5.83□□□□□ -1.48
SOX2P48431 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 AC112503.2-201ENST00000609005 552 ntBASIC5.83□□□□□ -1.48
SOX2P48431 AC063944.3-201ENST00000609969 533 ntBASIC5.83□□□□□ -1.48
SOX2P48431 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX2P48431 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.83□□□□□ -1.48
SOX2P48431 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 AL445984.1-201ENST00000637834 659 ntBASIC5.83□□□□□ -1.48
SOX2P48431 MAPK10-350ENST00000641777 965 ntBASIC5.83□□□□□ -1.48
SOX2P48431 CASC19-261ENST00000641853 1638 ntBASIC5.83□□□□□ -1.48
SOX2P48431 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 CASC19-238ENST00000641523 1558 ntBASIC5.83□□□□□ -1.48
SOX2P48431 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 AL157831.2-201ENST00000564681 3095 ntBASIC5.83□□□□□ -1.48
SOX2P48431 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 AL731532.1-201ENST00000623972 4236 ntBASIC5.82□□□□□ -1.48
SOX2P48431 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX2P48431 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SOX2P48431 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX2P48431 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 RNA5SP188-201ENST00000362916 129 ntBASIC5.82□□□□□ -1.48
SOX2P48431 SNORA30B-201ENST00000365319 129 ntBASIC5.82□□□□□ -1.48
SOX2P48431 MIR421-201ENST00000365696 85 ntBASIC5.82□□□□□ -1.48
SOX2P48431 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX2P48431 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX2P48431 AL353692.2-201ENST00000407054 335 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC069282.1-201ENST00000411911 526 ntBASIC5.82□□□□□ -1.48
SOX2P48431 SNX18P13-201ENST00000412442 529 ntBASIC5.82□□□□□ -1.48
SOX2P48431 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX2P48431 TRIM60P17-201ENST00000415181 719 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC109638.1-201ENST00000417406 326 ntBASIC5.82□□□□□ -1.48
SOX2P48431 GAPDHP57-201ENST00000424400 585 ntBASIC5.82□□□□□ -1.48
SOX2P48431 GAPDHP69-201ENST00000425504 1008 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 NIP7P1-201ENST00000433227 512 ntBASIC5.82□□□□□ -1.48
SOX2P48431 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX2P48431 AL355355.1-201ENST00000442900 793 ntBASIC5.82□□□□□ -1.48
SOX2P48431 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms