Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NPM1P23-201ENST00000440193 849 ntBASIC6.39□□□□□ -1.39
RPA3P35244 GAPDHP33-201ENST00000443168 1013 ntBASIC6.39□□□□□ -1.39
RPA3P35244 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.39□□□□□ -1.39
RPA3P35244 AC079922.1-201ENST00000443291 359 ntBASIC6.39□□□□□ -1.39
RPA3P35244 AL034369.1-201ENST00000453808 477 ntBASIC6.39□□□□□ -1.39
RPA3P35244 RPS7P11-201ENST00000484240 586 ntBASIC6.39□□□□□ -1.39
RPA3P35244 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.39□□□□□ -1.39
RPA3P35244 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.39□□□□□ -1.39
RPA3P35244 IGKV1D-22-201ENST00000518953 324 ntBASIC6.39□□□□□ -1.39
RPA3P35244 PPIAP14-201ENST00000577627 496 ntBASIC6.39□□□□□ -1.39
RPA3P35244 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.39□□□□□ -1.39
RPA3P35244 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.39□□□□□ -1.39
RPA3P35244 AL390877.1-201ENST00000605704 214 ntBASIC6.39□□□□□ -1.39
RPA3P35244 SNORD96A-201ENST00000606577 79 ntBASIC6.39□□□□□ -1.39
RPA3P35244 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.39□□□□□ -1.39
RPA3P35244 RAB28P4-201ENST00000622233 665 ntBASIC6.39□□□□□ -1.39
RPA3P35244 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.39□□□□□ -1.39
RPA3P35244 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
RPA3P35244 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.39□□□□□ -1.39
RPA3P35244 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.39□□□□□ -1.39
RPA3P35244 AC092724.1-201ENST00000624623 3397 ntBASIC6.39□□□□□ -1.39
RPA3P35244 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 SAGE3P-201ENST00000619800 1635 ntBASIC6.39□□□□□ -1.39
RPA3P35244 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RPA3P35244 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RPA3P35244 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.38□□□□□ -1.39
RPA3P35244 AL121768.1-201ENST00000613917 2544 ntBASIC6.38□□□□□ -1.39
RPA3P35244 SMG1P5-202ENST00000529428 4219 ntBASIC6.38□□□□□ -1.39
RPA3P35244 SMG1P2-201ENST00000566127 4221 ntBASIC6.38□□□□□ -1.39
RPA3P35244 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RPA3P35244 PPIAP24-201ENST00000328558 471 ntBASIC6.38□□□□□ -1.39
RPA3P35244 GNG5P2-201ENST00000372054 207 ntBASIC6.38□□□□□ -1.39
RPA3P35244 AL121835.1-201ENST00000404250 354 ntBASIC6.38□□□□□ -1.39
RPA3P35244 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.38□□□□□ -1.39
RPA3P35244 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.38□□□□□ -1.39
RPA3P35244 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.38□□□□□ -1.39
RPA3P35244 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.38□□□□□ -1.39
RPA3P35244 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.38□□□□□ -1.39
RPA3P35244 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.38□□□□□ -1.39
RPA3P35244 SCARNA5-201ENST00000516201 276 ntBASIC6.38□□□□□ -1.39
RPA3P35244 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.38□□□□□ -1.39
RPA3P35244 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.38□□□□□ -1.39
RPA3P35244 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.38□□□□□ -1.39
RPA3P35244 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.38□□□□□ -1.39
RPA3P35244 AP003080.1-202ENST00000526526 915 ntBASIC6.38□□□□□ -1.39
RPA3P35244 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 AC084851.2-201ENST00000530377 364 ntBASIC6.38□□□□□ -1.39
RPA3P35244 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.38□□□□□ -1.39
RPA3P35244 MIR744-201ENST00000578242 98 ntBASIC6.38□□□□□ -1.39
RPA3P35244 MIR3189-201ENST00000578735 73 ntBASIC6.38□□□□□ -1.39
RPA3P35244 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.38□□□□□ -1.39
RPA3P35244 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.38□□□□□ -1.39
RPA3P35244 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 MIR6503-201ENST00000622884 86 ntBASIC6.38□□□□□ -1.39
RPA3P35244 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RPA3P35244 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RPA3P35244 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.38□□□□□ -1.39
RPA3P35244 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPA3P35244 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
RPA3P35244 AC092070.2-203ENST00000598377 3644 ntBASIC6.38□□□□□ -1.39
RPA3P35244 AL731532.1-201ENST00000623972 4236 ntBASIC6.38□□□□□ -1.39
RPA3P35244 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RPA3P35244 AC022164.1-201ENST00000568767 2673 ntBASIC6.37□□□□□ -1.39
RPA3P35244 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RPA3P35244 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RPA3P35244 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPA3P35244 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RPA3P35244 CCAT2-201ENST00000630920 1752 ntBASIC6.37□□□□□ -1.39
RPA3P35244 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.37□□□□□ -1.39
RPA3P35244 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPA3P35244 FANCD2P2-201ENST00000437591 1400 ntBASIC6.37□□□□□ -1.39
RPA3P35244 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.37□□□□□ -1.39
RPA3P35244 SSR1P1-201ENST00000407630 814 ntBASIC6.37□□□□□ -1.39
RPA3P35244 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPA3P35244 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.37□□□□□ -1.39
RPA3P35244 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RPA3P35244 AL022324.2-201ENST00000434827 780 ntBASIC6.37□□□□□ -1.39
RPA3P35244 AC092106.2-201ENST00000436597 487 ntBASIC6.37□□□□□ -1.39
RPA3P35244 PA2G4P1-201ENST00000442248 1197 ntBASIC6.37□□□□□ -1.39
RPA3P35244 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.37□□□□□ -1.39
RPA3P35244 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.37□□□□□ -1.39
RPA3P35244 AL445687.2-201ENST00000458156 728 ntBASIC6.37□□□□□ -1.39
RPA3P35244 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RPA3P35244 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms