Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 RN7SKP47-201ENST00000365347 328 ntBASIC8.78□□□□□ -1
RXRBP28702 AC006511.2-201ENST00000388966 660 ntBASIC8.78□□□□□ -1
RXRBP28702 AL590143.1-201ENST00000405071 138 ntBASIC8.78□□□□□ -1
RXRBP28702 AL353692.2-201ENST00000407054 335 ntBASIC8.78□□□□□ -1
RXRBP28702 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.78□□□□□ -1
RXRBP28702 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
RXRBP28702 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 MTND4P6-201ENST00000438297 472 ntBASIC8.78□□□□□ -1
RXRBP28702 EMC3-AS1-205ENST00000438698 534 ntBASIC8.78□□□□□ -1
RXRBP28702 ATP5C1P1-201ENST00000441945 895 ntBASIC8.78□□□□□ -1
RXRBP28702 SEPT14P12-201ENST00000442280 560 ntBASIC8.78□□□□□ -1
RXRBP28702 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC8.78□□□□□ -1
RXRBP28702 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 AC026336.1-201ENST00000466577 351 ntBASIC8.78□□□□□ -1
RXRBP28702 RN7SKP265-201ENST00000516448 223 ntBASIC8.78□□□□□ -1
RXRBP28702 RNA5SP438-201ENST00000516561 112 ntBASIC8.78□□□□□ -1
RXRBP28702 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.78□□□□□ -1
RXRBP28702 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 AC079600.1-201ENST00000550326 297 ntBASIC8.78□□□□□ -1
RXRBP28702 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC8.78□□□□□ -1
RXRBP28702 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.78□□□□□ -1
RXRBP28702 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.78□□□□□ -1
RXRBP28702 AC009303.3-201ENST00000591103 736 ntBASIC8.78□□□□□ -1
RXRBP28702 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 CASC19-222ENST00000641321 1173 ntBASIC8.78□□□□□ -1
RXRBP28702 OR5AC4P-202ENST00000642086 985 ntBASIC8.78□□□□□ -1
RXRBP28702 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 AL080317.3-201ENST00000607434 4315 ntBASIC8.78□□□□□ -1
RXRBP28702 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
RXRBP28702 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.78□□□□□ -1
RXRBP28702 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 AC009108.3-201ENST00000602739 3515 ntBASIC8.77□□□□□ -1
RXRBP28702 AC127024.8-201ENST00000623719 2094 ntBASIC8.77□□□□□ -1
RXRBP28702 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.77□□□□□ -1
RXRBP28702 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
RXRBP28702 DDX43P1-201ENST00000510713 1763 ntBASIC8.77□□□□□ -1.01
RXRBP28702 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
RXRBP28702 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 IGLV3-4-201ENST00000432300 244 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC8.77□□□□□ -1.01
RXRBP28702 AL590004.3-202ENST00000445883 451 ntBASIC8.77□□□□□ -1.01
RXRBP28702 SULT1D1P-201ENST00000458020 882 ntBASIC8.77□□□□□ -1.01
RXRBP28702 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC8.77□□□□□ -1.01
RXRBP28702 RN7SL104P-201ENST00000498686 293 ntBASIC8.77□□□□□ -1.01
RXRBP28702 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC8.77□□□□□ -1.01
RXRBP28702 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC8.77□□□□□ -1.01
RXRBP28702 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC8.77□□□□□ -1.01
RXRBP28702 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC8.77□□□□□ -1.01
RXRBP28702 MRPS36P5-201ENST00000551909 298 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC8.77□□□□□ -1.01
RXRBP28702 AGGF1P5-201ENST00000567900 919 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AL589674.2-201ENST00000604304 337 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AC024940.4-201ENST00000605507 246 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AC005332.10-201ENST00000612725 619 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AL445649.1-201ENST00000615941 691 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AL035661.1-201ENST00000620459 1144 ntBASIC8.77□□□□□ -1.01
RXRBP28702 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
RXRBP28702 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.77□□□□□ -1.01
RXRBP28702 AC109780.1-201ENST00000451768 1344 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AC117409.1-201ENST00000470499 1310 ntBASIC8.77□□□□□ -1.01
RXRBP28702 AL513548.1-201ENST00000562904 1724 ntBASIC8.77□□□□□ -1.01
RXRBP28702 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.77□□□□□ -1.01
RXRBP28702 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RXRBP28702 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.76□□□□□ -1.01
RXRBP28702 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.76□□□□□ -1.01
RXRBP28702 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.76□□□□□ -1.01
RXRBP28702 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RXRBP28702 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
RXRBP28702 U3.7-201ENST00000363668 216 ntBASIC8.76□□□□□ -1.01
RXRBP28702 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC8.76□□□□□ -1.01
RXRBP28702 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms