Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RN7SKP108-201ENST00000411367 328 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
HOXC4P09017 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC4P09017 AL354707.3-201ENST00000427308 331 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 PCNPP2-201ENST00000441651 455 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 AL590004.3-202ENST00000445883 451 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 OR52I1-201ENST00000450052 1050 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 VN1R38P-201ENST00000450265 887 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 PFN1P8-201ENST00000497012 543 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC4P09017 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXC4P09017 MAST4-IT1-201ENST00000514241 658 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC4P09017 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC4P09017 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC4P09017 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC4P09017 AC134669.1-201ENST00000581275 672 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC4P09017 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC4P09017 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC4P09017 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC4P09017 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 PARP4P1-201ENST00000435945 2337 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC4P09017 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 AL021877.2-201ENST00000624442 10684 ntBASIC6.26□□□□□ -1.41
HOXC4P09017 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC4P09017 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC4P09017 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
HOXC4P09017 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 AC010401.2-201ENST00000575137 4934 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC4P09017 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HOXC4P09017 STAG3L4-201ENST00000352103 530 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC4P09017 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXC4P09017 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC4P09017 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC4P09017 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC4P09017 MRPS21P3-201ENST00000436696 262 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 RPL12P30-201ENST00000488389 499 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC4P09017 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC4P09017 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC4P09017 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC4P09017 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC4P09017 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC4P09017 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC4P09017 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 RPSAP75-201ENST00000605848 301 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC4P09017 AC010998.3-201ENST00000613871 631 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC4P09017 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 AC104966.1-201ENST00000467010 1464 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 AC010168.2-201ENST00000562691 5428 ntBASIC6.25□□□□□ -1.41
HOXC4P09017 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HOXC4P09017 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC4P09017 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC4P09017 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC4P09017 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC4P09017 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 AL117339.4-201ENST00000608335 7063 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 LPAL2-203ENST00000454031 2498 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC4P09017 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC4P09017 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HOXC4P09017 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HOXC4P09017 FAM32BP-201ENST00000344033 333 ntBASIC6.24□□□□□ -1.41
HOXC4P09017 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC4P09017 GCNT1P4-201ENST00000404096 329 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms