Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.61□□□□□ -1.51
APOA1P02647 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.61□□□□□ -1.51
APOA1P02647 AC025252.2-201ENST00000537470 502 ntBASIC5.61□□□□□ -1.51
APOA1P02647 AC140063.1-201ENST00000541343 259 ntBASIC5.61□□□□□ -1.51
APOA1P02647 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC5.61□□□□□ -1.51
APOA1P02647 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC5.61□□□□□ -1.51
APOA1P02647 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
APOA1P02647 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
APOA1P02647 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.61□□□□□ -1.51
APOA1P02647 AC090241.1-201ENST00000587732 621 ntBASIC5.61□□□□□ -1.51
APOA1P02647 SNRPCP20-201ENST00000588011 210 ntBASIC5.61□□□□□ -1.51
APOA1P02647 AC010487.1-201ENST00000594408 1172 ntBASIC5.61□□□□□ -1.51
APOA1P02647 AL590032.1-201ENST00000604920 252 ntBASIC5.61□□□□□ -1.51
APOA1P02647 AL021368.3-201ENST00000607119 578 ntBASIC5.61□□□□□ -1.51
APOA1P02647 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC5.61□□□□□ -1.51
APOA1P02647 AC090099.1-204ENST00000623626 849 ntBASIC5.61□□□□□ -1.51
APOA1P02647 AC073263.3-201ENST00000624449 858 ntBASIC5.61□□□□□ -1.51
APOA1P02647 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.61□□□□□ -1.51
APOA1P02647 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.61□□□□□ -1.51
APOA1P02647 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOA1P02647 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
APOA1P02647 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.61□□□□□ -1.51
APOA1P02647 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOA1P02647 AC004076.2-201ENST00000620532 3323 ntBASIC5.61□□□□□ -1.51
APOA1P02647 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.6□□□□□ -1.51
APOA1P02647 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
APOA1P02647 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.6□□□□□ -1.51
APOA1P02647 AC125238.2-201ENST00000430003 1440 ntBASIC5.6□□□□□ -1.51
APOA1P02647 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.6□□□□□ -1.51
APOA1P02647 RPS3AP5-201ENST00000389400 821 ntBASIC5.6□□□□□ -1.51
APOA1P02647 RNA5SP53-201ENST00000391299 120 ntBASIC5.6□□□□□ -1.51
APOA1P02647 U3.43-201ENST00000410734 213 ntBASIC5.6□□□□□ -1.51
APOA1P02647 AL158827.1-201ENST00000416300 391 ntBASIC5.6□□□□□ -1.51
APOA1P02647 AC015977.1-201ENST00000418887 292 ntBASIC5.6□□□□□ -1.51
APOA1P02647 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC5.6□□□□□ -1.51
APOA1P02647 SPATA20P1-201ENST00000423089 438 ntBASIC5.6□□□□□ -1.51
APOA1P02647 MTND1P10-201ENST00000426108 832 ntBASIC5.6□□□□□ -1.51
APOA1P02647 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.6□□□□□ -1.51
APOA1P02647 AC003989.1-201ENST00000434569 565 ntBASIC5.6□□□□□ -1.51
APOA1P02647 DBIL5P2-201ENST00000443827 253 ntBASIC5.6□□□□□ -1.51
APOA1P02647 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 TAAR3P-202ENST00000481759 1025 ntBASIC5.6□□□□□ -1.51
APOA1P02647 RPS7P11-201ENST00000484240 586 ntBASIC5.6□□□□□ -1.51
APOA1P02647 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.6□□□□□ -1.51
APOA1P02647 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.6□□□□□ -1.51
APOA1P02647 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 AC138904.2-201ENST00000614412 107 ntBASIC5.6□□□□□ -1.51
APOA1P02647 AL669830.1-201ENST00000621457 656 ntBASIC5.6□□□□□ -1.51
APOA1P02647 MRPL57P1-201ENST00000621486 265 ntBASIC5.6□□□□□ -1.51
APOA1P02647 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.6□□□□□ -1.51
APOA1P02647 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.6□□□□□ -1.51
APOA1P02647 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.6□□□□□ -1.51
APOA1P02647 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
APOA1P02647 AC097063.1-201ENST00000426714 1797 ntBASIC5.6□□□□□ -1.51
APOA1P02647 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
APOA1P02647 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
APOA1P02647 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
APOA1P02647 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
APOA1P02647 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
APOA1P02647 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.59□□□□□ -1.51
APOA1P02647 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.59□□□□□ -1.51
APOA1P02647 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.59□□□□□ -1.51
APOA1P02647 AC020633.1-201ENST00000468439 2247 ntBASIC5.59□□□□□ -1.51
APOA1P02647 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.59□□□□□ -1.51
APOA1P02647 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
APOA1P02647 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
APOA1P02647 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
APOA1P02647 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
APOA1P02647 CCNT2P1-201ENST00000423082 1315 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms