Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX4O60224 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SSX4O60224 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 AC137056.2-201ENST00000624055 1958 ntBASIC5.95□□□□□ -1.46
SSX4O60224 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 AC107977.1-201ENST00000355745 939 ntBASIC5.95□□□□□ -1.46
SSX4O60224 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 RNA5SP514-201ENST00000363717 111 ntBASIC5.95□□□□□ -1.46
SSX4O60224 RN7SKP189-201ENST00000365042 330 ntBASIC5.95□□□□□ -1.46
SSX4O60224 RNA5SP172-201ENST00000365061 118 ntBASIC5.95□□□□□ -1.46
SSX4O60224 FAM204BP-201ENST00000369171 701 ntBASIC5.95□□□□□ -1.46
SSX4O60224 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 RPSAP60-201ENST00000415403 880 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AC000089.1-201ENST00000424559 801 ntBASIC5.95□□□□□ -1.46
SSX4O60224 CHCHD3P1-201ENST00000425516 676 ntBASIC5.95□□□□□ -1.46
SSX4O60224 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 AC095038.1-201ENST00000429248 1591 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 AC010086.1-201ENST00000437359 1052 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AL512637.1-201ENST00000439523 1231 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX4O60224 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX4O60224 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.95□□□□□ -1.46
SSX4O60224 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX4O60224 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX4O60224 AL096803.1-201ENST00000456921 1021 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AC019084.1-201ENST00000457337 432 ntBASIC5.95□□□□□ -1.46
SSX4O60224 SNORA81.1-201ENST00000458922 177 ntBASIC5.95□□□□□ -1.46
SSX4O60224 RPS26P11-201ENST00000463445 348 ntBASIC5.95□□□□□ -1.46
SSX4O60224 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 AP003385.3-201ENST00000472498 287 ntBASIC5.95□□□□□ -1.46
SSX4O60224 RPS26P6-201ENST00000475156 348 ntBASIC5.95□□□□□ -1.46
SSX4O60224 OR2A3P-201ENST00000493774 953 ntBASIC5.95□□□□□ -1.46
SSX4O60224 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX4O60224 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.95□□□□□ -1.46
SSX4O60224 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX4O60224 HNRNPCP1-201ENST00000556181 766 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.95□□□□□ -1.46
SSX4O60224 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AC100814.1-201ENST00000606963 623 ntBASIC5.95□□□□□ -1.46
SSX4O60224 AP000432.2-201ENST00000624164 2048 ntBASIC5.95□□□□□ -1.46
SSX4O60224 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 BX284613.1-201ENST00000452221 1641 ntBASIC5.95□□□□□ -1.46
SSX4O60224 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
SSX4O60224 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SSX4O60224 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX4O60224 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX4O60224 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX4O60224 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 AC130360.2-201ENST00000533477 1556 ntBASIC5.94□□□□□ -1.46
SSX4O60224 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SSX4O60224 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX4O60224 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SSX4O60224 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SSX4O60224 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 SNORD94-201ENST00000386037 137 ntBASIC5.94□□□□□ -1.46
SSX4O60224 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms