Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL136984.1-201ENST00000607611 1893 ntBASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 RPL12P7-201ENST00000493832 494 ntBASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 RNA5SP418-201ENST00000515951 117 ntBASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 AC005332.4-201ENST00000592752 579 ntBASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 AC003992.1-201ENST00000635364 557 ntBASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 CCNT2P1-201ENST00000423082 1315 ntBASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAV27A0A087WT01 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 ZNF37CP-201ENST00000406795 241 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 H3F3BP1-201ENST00000440551 403 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 GAPDHP37-201ENST00000442317 968 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 NPM1P9-201ENST00000453156 844 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 RANP2-201ENST00000456833 229 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC073594.1-201ENST00000462065 364 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC063955.1-201ENST00000462872 685 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 RN7SL790P-201ENST00000474043 298 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 MTND6P8-201ENST00000503471 522 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC010343.2-201ENST00000510162 224 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 RNA5SP116-201ENST00000516132 98 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC090651.1-201ENST00000567865 634 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AC036176.3-201ENST00000602456 418 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AL512413.1-201ENST00000606489 382 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AL162377.2-201ENST00000624532 337 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 KYNUP2-201ENST00000582280 1329 ntBASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAV27A0A087WT01 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC022306.1-201ENST00000560489 1562 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AL033519.1-201ENST00000407266 307 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 MIR1266-201ENST00000408125 84 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 NPM1P36-201ENST00000415681 835 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AL645939.3-201ENST00000435408 225 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC016908.1-201ENST00000442571 1219 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms