Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC245052.7-201ENST00000601161 359 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL078623.1-201ENST00000602702 907 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC007671.1-201ENST00000616957 830 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 RAB28P4-201ENST00000622233 665 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC005332.9-201ENST00000620266 2921 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 EEF1A1P24-201ENST00000451469 1378 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC010624.4-201ENST00000597606 1351 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC110373.1-201ENST00000505994 3505 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 NLRP3P1-201ENST00000622303 1785 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RNU1-5P-201ENST00000362684 144 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RNA5SP350-201ENST00000363298 111 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RN7SKP118-201ENST00000364331 330 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL360271.1-201ENST00000395679 510 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RANP6-201ENST00000413691 644 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 CYCSP52-201ENST00000422857 310 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 OR5W1P-201ENST00000423705 938 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 NPM1P9-201ENST00000453156 844 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 MARK2P8-201ENST00000476069 952 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RN7SL655P-201ENST00000486087 298 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RPL5P33-201ENST00000487833 905 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC131392.1-201ENST00000506490 633 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 SCARNA5-201ENST00000516201 276 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AP005639.1-201ENST00000526939 192 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AP000619.2-201ENST00000546014 969 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RN7SL208P-201ENST00000577964 296 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AC139792.1-201ENST00000607051 647 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL121936.2-201ENST00000641935 662 ntBASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DRB4X5D2U9 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms