Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 RN7SKP275-201ENST00000364626 301 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AL157702.1-201ENST00000398764 426 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AL139805.1-201ENST00000407837 289 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 RN7SKP161-201ENST00000411110 305 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC115283.1-201ENST00000427353 400 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 RPL12P11-201ENST00000439970 501 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AL590004.3-202ENST00000445883 451 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC022206.1-201ENST00000495947 347 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AL845552.1-201ENST00000556820 323 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC002310.3-201ENST00000569728 723 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC124916.2-201ENST00000604416 224 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AL445647.2-201ENST00000615170 130 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 MIR6811-201ENST00000620409 58 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AL109924.4-201ENST00000623089 670 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 LYARP1-201ENST00000436977 1501 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC104966.1-201ENST00000467010 1464 ntBASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KIAA1549Q9HCM3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC008957.3-201ENST00000624112 2242 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 RN7SKP269-201ENST00000365545 319 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 RNA5SP122-201ENST00000384457 108 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 VN1R3-201ENST00000418822 919 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AL133351.3-201ENST00000454998 193 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC068228.1-201ENST00000461723 211 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AP002453.1-201ENST00000492327 668 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 IGKV2-4-201ENST00000523070 340 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AP001858.2-201ENST00000536213 601 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 MIR4502-201ENST00000580432 81 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC005332.4-201ENST00000592752 579 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC073488.6-201ENST00000632293 754 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 LPP-208ENST00000448637 5835 ntTSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 OR11H13P-201ENST00000359695 979 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AMYP1-201ENST00000440059 1023 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC009237.1-201ENST00000442127 744 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 RPS10P18-201ENST00000442662 495 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC094085.1-201ENST00000468914 584 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC095052.1-201ENST00000509955 863 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC009879.1-201ENST00000520029 839 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms