Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC007938.1-201ENST00000562524 2902 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 HCG18-244ENST00000602516 2890 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 CTH-203ENST00000411986 2044 ntTSL 2 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 NDUFA5P9-201ENST00000472609 340 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC098847.1-201ENST00000473094 348 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC008429.2-201ENST00000523057 864 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 ATP5J2P6-201ENST00000565203 266 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 MIR192-201ENST00000384915 110 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AL139039.2-201ENST00000407436 479 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 OR3D1P-201ENST00000438288 955 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 CNOT7P2-201ENST00000441051 832 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 RN7SL172P-201ENST00000460535 303 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 RN7SL643P-201ENST00000471845 291 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 HIGD1AP14-201ENST00000507617 282 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 MIR4298-201ENST00000584380 73 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC008115.3-201ENST00000614874 549 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC004943.1-203ENST00000624370 1074 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 MIR7641-1-201ENST00000627518 61 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AL138690.1-201ENST00000568811 2243 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 OR4C1P-202ENST00000641065 1569 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 RPL9P21-201ENST00000392269 505 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 METTL15P3-201ENST00000415522 1221 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 RPS26P13-201ENST00000419030 330 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 RPS11P7-201ENST00000442125 465 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 snoU13.22-201ENST00000459428 104 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 MIR4505-201ENST00000582238 73 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 OR7A1P-201ENST00000601206 970 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AC008115.4-201ENST00000619780 775 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AL139805.2-201ENST00000455305 2433 ntBASIC5.91□□□□□ -1.46
CHD8Q9HCK8 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHD8Q9HCK8 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 PDZK1P1-202ENST00000425209 1350 ntBASIC5.9□□□□□ -1.46
CHD8Q9HCK8 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 Z93929.1-201ENST00000418200 1475 ntBASIC5.9□□□□□ -1.46
CHD8Q9HCK8 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 AC099677.3-201ENST00000427081 395 ntBASIC5.9□□□□□ -1.46
CHD8Q9HCK8 TRGV7-201ENST00000427089 353 ntBASIC5.9□□□□□ -1.46
CHD8Q9HCK8 AC006466.1-201ENST00000438721 289 ntBASIC5.9□□□□□ -1.46
CHD8Q9HCK8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 RN7SKP23-201ENST00000625159 4301 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms