Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 RNA5SP110-201ENST00000362638 115 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 U3.43-201ENST00000410734 213 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 RN7SKP121-201ENST00000410842 305 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 PNKDP1-201ENST00000435914 430 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AMYP1-201ENST00000440059 1023 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AC009879.1-201ENST00000520029 839 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AC020765.1-201ENST00000604296 328 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AL132640.3-201ENST00000630473 177 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 AC025809.2-201ENST00000625085 1802 ntBASIC6.87□□□□□ -1.31
NXF3Q9H4D5 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.87□□□□□ -1.31
NXF3Q9H4D5 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AC027575.3-201ENST00000583058 2747 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 FO082842.1-201ENST00000423552 1370 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AL050335.1-201ENST00000396909 869 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 KCTD9P1-201ENST00000430462 1167 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 RN7SL326P-201ENST00000477493 296 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AC106800.3-201ENST00000511389 308 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 NATP-201ENST00000523491 878 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AC090115.2-201ENST00000548060 883 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 MIR5095-201ENST00000578844 88 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AC079315.1-201ENST00000602952 623 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AL162377.2-201ENST00000624532 337 ntBASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NXF3Q9H4D5 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 TNPO1P2-201ENST00000426249 2665 ntBASIC6.85□□□□□ -1.31
NXF3Q9H4D5 AC013488.1-201ENST00000526618 1838 ntBASIC6.85□□□□□ -1.31
NXF3Q9H4D5 CUBNP3-201ENST00000457461 1784 ntBASIC6.85□□□□□ -1.31
NXF3Q9H4D5 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 LPAL2-203ENST00000454031 2498 ntBASIC6.85□□□□□ -1.31
NXF3Q9H4D5 EIF3EP1-201ENST00000433978 1316 ntBASIC6.85□□□□□ -1.31
NXF3Q9H4D5 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 VN1R3-201ENST00000418822 919 ntBASIC6.85□□□□□ -1.31
NXF3Q9H4D5 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.85□□□□□ -1.31
NXF3Q9H4D5 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms