Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC007998.4-201ENST00000612496 2533 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RNA5SP382-201ENST00000363355 112 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RN7SKP186-201ENST00000365371 303 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AL139135.1-201ENST00000412675 209 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RANP6-201ENST00000413691 644 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AL138479.1-201ENST00000426913 484 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AL596268.1-201ENST00000427910 1048 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RPL7AP30-201ENST00000482859 796 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC114728.1-201ENST00000488289 483 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RPL5P14-201ENST00000494197 878 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC137549.1-201ENST00000514243 533 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC007494.1-201ENST00000562293 760 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC233702.7-202ENST00000582941 211 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 MIR8082-201ENST00000612488 81 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC117503.3-201ENST00000623811 601 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC006453.3-201ENST00000635891 377 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AC025470.1-201ENST00000510053 2032 ntBASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC50Q8IVM0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AC010132.4-201ENST00000569883 1368 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 RNA5SP302-201ENST00000364896 100 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AL139100.1-201ENST00000408001 498 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 RNA5SP115-201ENST00000411160 107 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 RPL23AP85-201ENST00000421838 433 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AL672212.1-201ENST00000422246 400 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 MRPS21P2-201ENST00000424704 264 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AC083855.1-201ENST00000440041 258 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AL158214.1-201ENST00000444423 404 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 UBBP5-201ENST00000446970 266 ntBASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC50Q8IVM0 AC090241.1-201ENST00000587732 621 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms