Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 AC023310.2-201ENST00000553844 547 ntBASIC4.33□□□□□ -1.72
SCXQ7RTU7 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 AC107958.1-201ENST00000556576 290 ntBASIC4.33□□□□□ -1.72
SCXQ7RTU7 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCXQ7RTU7 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 AC020914.7-201ENST00000594477 545 ntBASIC4.33□□□□□ -1.72
SCXQ7RTU7 AC006328.2-201ENST00000623198 397 ntBASIC4.33□□□□□ -1.72
SCXQ7RTU7 AC012005.2-201ENST00000624333 397 ntBASIC4.33□□□□□ -1.72
SCXQ7RTU7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCXQ7RTU7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCXQ7RTU7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCXQ7RTU7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCXQ7RTU7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCXQ7RTU7 TMCC1P1-201ENST00000518897 1980 ntBASIC4.33□□□□□ -1.72
SCXQ7RTU7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.33□□□□□ -1.72
SCXQ7RTU7 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCXQ7RTU7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC105114.1-201ENST00000624795 1862 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 IMMTP1-201ENST00000435590 2219 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 RNA5SP333-201ENST00000363466 118 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 RNA5SP334-201ENST00000364825 118 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 RN7SKP47-201ENST00000365347 328 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AL133260.1-201ENST00000405720 405 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 DUTP4-201ENST00000424782 475 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC002069.1-201ENST00000429649 1159 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 SNRPBP1-201ENST00000443634 282 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC234771.2-201ENST00000445718 597 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 PFN1P11-201ENST00000445829 389 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC236972.4-201ENST00000458091 963 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 RPS14P8-201ENST00000478778 369 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 SNX18P23-201ENST00000510867 677 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 SNRPCP6-201ENST00000528310 210 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC140063.1-201ENST00000541343 259 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC005519.1-201ENST00000554490 601 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC037479.1-201ENST00000558361 625 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC004908.1-201ENST00000606572 541 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AC005828.7-201ENST00000607331 556 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 AL359091.2-201ENST00000609303 556 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AL162456.1-201ENST00000634535 2006 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms