Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 OR11J2P-201ENST00000555298 907 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 SKA2-207ENST00000583380 583 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC012557.1-201ENST00000607115 611 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC003992.1-201ENST00000635364 557 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 GALNT15-201ENST00000339732 4669 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC023421.1-201ENST00000590535 1785 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 RNA5SP87-201ENST00000384155 118 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 PPATP2-201ENST00000605635 508 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 MELK-207ENST00000536860 2342 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 GSN-AS1-201ENST00000414544 4763 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC007342.5-201ENST00000571340 2142 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 RN7SKP104-201ENST00000362605 328 ntBASIC4.92□□□□□ -1.62
VPS13CQ709C8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.92□□□□□ -1.62
VPS13CQ709C8 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.92□□□□□ -1.62
VPS13CQ709C8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 CYP4F32P-201ENST00000426492 504 ntBASIC4.92□□□□□ -1.62
VPS13CQ709C8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 MAPK10-323ENST00000641493 3207 ntBASIC4.92□□□□□ -1.62
VPS13CQ709C8 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC137768.1-201ENST00000549998 553 ntBASIC4.92□□□□□ -1.62
VPS13CQ709C8 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13CQ709C8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13CQ709C8 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 AC005033.1-201ENST00000428904 813 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 SUMO2P3-201ENST00000438311 288 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 AC084337.1-201ENST00000524809 686 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 AC008115.4-201ENST00000619780 775 ntBASIC4.91□□□□□ -1.62
VPS13CQ709C8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13CQ709C8 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13CQ709C8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms