Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.7□□□□□ -1.5
SRP9P49458 AL049697.3-201ENST00000406493 982 ntBASIC5.7□□□□□ -1.5
SRP9P49458 AP003385.1-201ENST00000426387 893 ntBASIC5.7□□□□□ -1.5
SRP9P49458 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.7□□□□□ -1.5
SRP9P49458 NPM1P9-201ENST00000453156 844 ntBASIC5.7□□□□□ -1.5
SRP9P49458 CCNJP2-201ENST00000457810 1163 ntBASIC5.7□□□□□ -1.5
SRP9P49458 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SRP9P49458 AC022730.1-201ENST00000473114 568 ntBASIC5.7□□□□□ -1.5
SRP9P49458 RPS4XP17-201ENST00000479057 754 ntBASIC5.7□□□□□ -1.5
SRP9P49458 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.7□□□□□ -1.5
SRP9P49458 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.7□□□□□ -1.5
SRP9P49458 AC083906.1-201ENST00000509298 406 ntBASIC5.7□□□□□ -1.5
SRP9P49458 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.7□□□□□ -1.5
SRP9P49458 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.7□□□□□ -1.5
SRP9P49458 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.7□□□□□ -1.5
SRP9P49458 AC131935.1-201ENST00000524621 333 ntBASIC5.7□□□□□ -1.5
SRP9P49458 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SRP9P49458 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.7□□□□□ -1.5
SRP9P49458 RPL7AP69-201ENST00000595306 806 ntBASIC5.7□□□□□ -1.5
SRP9P49458 AC012175.1-201ENST00000603755 531 ntBASIC5.7□□□□□ -1.5
SRP9P49458 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.7□□□□□ -1.5
SRP9P49458 AC022001.1-201ENST00000605193 268 ntBASIC5.7□□□□□ -1.5
SRP9P49458 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.7□□□□□ -1.5
SRP9P49458 AC004241.2-201ENST00000614562 444 ntBASIC5.7□□□□□ -1.5
SRP9P49458 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SRP9P49458 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SRP9P49458 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SRP9P49458 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SRP9P49458 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.7□□□□□ -1.5
SRP9P49458 AL353763.1-201ENST00000624467 1628 ntBASIC5.7□□□□□ -1.5
SRP9P49458 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SRP9P49458 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.69□□□□□ -1.5
SRP9P49458 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 RNA5SP321-201ENST00000362722 111 ntBASIC5.69□□□□□ -1.5
SRP9P49458 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SRP9P49458 RNU1-46P-201ENST00000384425 164 ntBASIC5.69□□□□□ -1.5
SRP9P49458 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SRP9P49458 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.69□□□□□ -1.5
SRP9P49458 VN1R53P-201ENST00000429536 957 ntBASIC5.69□□□□□ -1.5
SRP9P49458 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.69□□□□□ -1.5
SRP9P49458 AC234771.4-201ENST00000441416 730 ntBASIC5.69□□□□□ -1.5
SRP9P49458 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 MGAT2P1-201ENST00000449718 797 ntBASIC5.69□□□□□ -1.5
SRP9P49458 RPL5P33-201ENST00000487833 905 ntBASIC5.69□□□□□ -1.5
SRP9P49458 RN7SL37P-201ENST00000490461 307 ntBASIC5.69□□□□□ -1.5
SRP9P49458 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.69□□□□□ -1.5
SRP9P49458 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.69□□□□□ -1.5
SRP9P49458 RN7SKP196-201ENST00000516267 345 ntBASIC5.69□□□□□ -1.5
SRP9P49458 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.69□□□□□ -1.5
SRP9P49458 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.69□□□□□ -1.5
SRP9P49458 AC007068.2-201ENST00000543168 395 ntBASIC5.69□□□□□ -1.5
SRP9P49458 AC073916.1-201ENST00000545095 130 ntBASIC5.69□□□□□ -1.5
SRP9P49458 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.69□□□□□ -1.5
SRP9P49458 AL445383.1-201ENST00000554689 874 ntBASIC5.69□□□□□ -1.5
SRP9P49458 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.69□□□□□ -1.5
SRP9P49458 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.69□□□□□ -1.5
SRP9P49458 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.69□□□□□ -1.5
SRP9P49458 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.69□□□□□ -1.5
SRP9P49458 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SRP9P49458 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
SRP9P49458 AL035425.4-201ENST00000624509 1063 ntBASIC5.69□□□□□ -1.5
SRP9P49458 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.69□□□□□ -1.5
SRP9P49458 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.69□□□□□ -1.5
SRP9P49458 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 AC092070.2-203ENST00000598377 3644 ntBASIC5.69□□□□□ -1.5
SRP9P49458 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SRP9P49458 AL442128.2-201ENST00000620246 1824 ntBASIC5.69□□□□□ -1.5
SRP9P49458 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRP9P49458 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SRP9P49458 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 AL731532.1-201ENST00000623972 4236 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC123769.1-201ENST00000530992 3192 ntBASIC5.68□□□□□ -1.5
SRP9P49458 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.68□□□□□ -1.5
SRP9P49458 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 RBPJP6-201ENST00000411556 1431 ntBASIC5.68□□□□□ -1.5
SRP9P49458 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms