Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL1P22362 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 AC005332.4-201ENST00000592752 579 ntBASIC5.44□□□□□ -1.54
CCL1P22362 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.44□□□□□ -1.54
CCL1P22362 AC027334.1-201ENST00000603257 310 ntBASIC5.44□□□□□ -1.54
CCL1P22362 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 MIR6849-201ENST00000618543 69 ntBASIC5.44□□□□□ -1.54
CCL1P22362 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL1P22362 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL1P22362 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
CCL1P22362 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL1P22362 AP001541.1-201ENST00000623322 1904 ntBASIC5.44□□□□□ -1.54
CCL1P22362 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL1P22362 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL1P22362 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL1P22362 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.43□□□□□ -1.54
CCL1P22362 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 AL033543.1-201ENST00000623440 13454 ntBASIC5.43□□□□□ -1.54
CCL1P22362 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CCL1P22362 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL1P22362 AC092634.1-201ENST00000366505 199 ntBASIC5.43□□□□□ -1.54
CCL1P22362 SNORA7A-201ENST00000384765 139 ntBASIC5.43□□□□□ -1.54
CCL1P22362 ZNF37CP-201ENST00000406795 241 ntBASIC5.43□□□□□ -1.54
CCL1P22362 RPL21P50-201ENST00000417698 477 ntBASIC5.43□□□□□ -1.54
CCL1P22362 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL1P22362 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.43□□□□□ -1.54
CCL1P22362 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.43□□□□□ -1.54
CCL1P22362 AL390879.1-201ENST00000439143 386 ntBASIC5.43□□□□□ -1.54
CCL1P22362 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.43□□□□□ -1.54
CCL1P22362 SLAMF6P1-201ENST00000451067 602 ntBASIC5.43□□□□□ -1.54
CCL1P22362 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL1P22362 RANP2-201ENST00000456833 229 ntBASIC5.43□□□□□ -1.54
CCL1P22362 AL445687.2-201ENST00000458156 728 ntBASIC5.43□□□□□ -1.54
CCL1P22362 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.43□□□□□ -1.54
CCL1P22362 AC009567.2-201ENST00000502989 349 ntBASIC5.43□□□□□ -1.54
CCL1P22362 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.43□□□□□ -1.54
CCL1P22362 CHEK2P2-201ENST00000554701 672 ntBASIC5.43□□□□□ -1.54
CCL1P22362 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.43□□□□□ -1.54
CCL1P22362 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.43□□□□□ -1.54
CCL1P22362 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCL1P22362 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCL1P22362 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCL1P22362 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.42□□□□□ -1.54
CCL1P22362 AC114876.1-201ENST00000490962 1366 ntBASIC5.42□□□□□ -1.54
CCL1P22362 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL1P22362 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCL1P22362 OR52B5P-204ENST00000641744 3467 ntBASIC5.42□□□□□ -1.54
CCL1P22362 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CCL1P22362 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CCL1P22362 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.42□□□□□ -1.54
CCL1P22362 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL1P22362 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCL1P22362 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.42□□□□□ -1.54
CCL1P22362 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL1P22362 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL1P22362 RN7SKP205-201ENST00000410999 307 ntBASIC5.42□□□□□ -1.54
CCL1P22362 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL1P22362 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.42□□□□□ -1.54
CCL1P22362 AL354707.3-201ENST00000427308 331 ntBASIC5.42□□□□□ -1.54
CCL1P22362 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 AC016908.1-201ENST00000442571 1219 ntBASIC5.42□□□□□ -1.54
CCL1P22362 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 TREML3P-201ENST00000457327 501 ntBASIC5.42□□□□□ -1.54
CCL1P22362 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CCL1P22362 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL1P22362 RN7SL413P-201ENST00000482700 297 ntBASIC5.42□□□□□ -1.54
CCL1P22362 AC008945.1-201ENST00000505144 499 ntBASIC5.42□□□□□ -1.54
CCL1P22362 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.42□□□□□ -1.54
CCL1P22362 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.42□□□□□ -1.54
CCL1P22362 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCL1P22362 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCL1P22362 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms