Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.07□□□□□ -1.44
COL5A1P20908 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 AL513218.1-201ENST00000606527 391 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 AC073488.3-201ENST00000631611 778 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 NEK2P2-201ENST00000438441 1338 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.07□□□□□ -1.44
COL5A1P20908 SHQ1P1-201ENST00000437111 1544 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.07□□□□□ -1.44
COL5A1P20908 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC6.07□□□□□ -1.44
COL5A1P20908 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.07□□□□□ -1.44
COL5A1P20908 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 RNFT1P3-201ENST00000340898 1052 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 RNA5SP514-201ENST00000363717 111 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 RNA5SP500-201ENST00000364486 119 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC136624.1-201ENST00000400791 413 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 AL096711.1-201ENST00000404780 554 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 AL023284.3-201ENST00000407767 334 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 RPS7P14-201ENST00000426405 583 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 NDUFS5P5-201ENST00000437256 321 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.06□□□□□ -1.44
COL5A1P20908 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC090651.1-201ENST00000567865 634 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 RBMY1HP-201ENST00000382759 1389 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC007485.2-201ENST00000623493 1667 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.06□□□□□ -1.44
COL5A1P20908 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 AC022905.1-201ENST00000503430 3048 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
COL5A1P20908 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 OR9K1P-201ENST00000326513 941 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 FUNDC2P3-201ENST00000334716 533 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 AL121835.1-201ENST00000404250 354 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 SUMO2P10-201ENST00000452006 288 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 CUBNP3-201ENST00000457461 1784 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 AL158068.1-201ENST00000506116 616 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 AC010624.4-201ENST00000597606 1351 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 AL080317.3-201ENST00000607434 4315 ntBASIC6.06□□□□□ -1.44
COL5A1P20908 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A1P20908 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A1P20908 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A1P20908 AC011504.1-201ENST00000623331 4103 ntBASIC6.05□□□□□ -1.44
COL5A1P20908 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A1P20908 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL5A1P20908 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A1P20908 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A1P20908 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A1P20908 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.05□□□□□ -1.44
COL5A1P20908 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A1P20908 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
COL5A1P20908 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A1P20908 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A1P20908 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms